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Hi Brian,
I have a couple of bioinfo tools that I "ported" to modal (blat, STAR, https://github.com/tdsone/modal-rna-seq-pipeline). Do you think this would be useful in biomodals as well (biomodal…
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### Aims/objectives.
The nomenclature for RNA types (table `rna_type`) is fixed *e.g.*
```mysql
+---------+-------------------+
| id | name |
+---------+-------------------+
…
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Hi,
i am wondering how good is xpore detect other RNA modification like ψ and ADP-ribosylation or is it mainly designed for m6A/RNA methylation?
Thanks in advance!
Yun
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In the design, the applied loads were 5.4 MN, 0.09 MN, and −8.9 MN in the x, y, and z directions, respectively. The moments were −1.6 MN m, −13.3 MN m, and 10.8 MN m in the x, y, and z directions, res…
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Hey,
I am Aadhavan, Graduate student from UC Davis. I work in the Kol lab. We are currently working on Feline infectious peritonitis (FIPv). We came across your open source software to design pro…
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I think your proposed experiment is well designed, has an adjustable scope that you can expand on later down the line, and has very clear short- and long-term goals.
I have a minor proposition. Wha…
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Hi,
I am aware that MACS2 is designed for finding peaks using ChIP-Seq data. However, when I run MACS2 on RNA-Seq data using default parameters, it seems to work as I expected. Now my question is d…
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I'd like to be able to design CRISPR guide RNAs with Poly. Below is a draft spec for a new CRISPR package:
## Spec
Our guide RNA design package should be lightweight and easily extendable and at…
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Hi @XueyiDong, I am currently using the sequin data, and was investigating the metadata. What does the counts…
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Hi, thanks for developing this nice tool!
I wonder if this tool can be applied into transcriptomic data although the original design is for proteomic data. I think it is all about abundance data an…