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GoekeLab
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xpore
Identification of differential RNA modifications from nanopore direct RNA sequencing
https://xpore.readthedocs.io/
MIT License
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Question about xpore and Motif Output
#220
niujiale
opened
2 days ago
0
error in xpore diffmod
#219
lyj95618
opened
1 month ago
2
version number needs to be updated
#218
nickst85
opened
1 month ago
1
KeyError: exon in xpore dataprep
#217
mumdark
opened
2 months ago
4
diffmod error
#216
rugilemat
closed
2 months ago
4
Eventalign.index from m6anet output and RNA004 compatibility
#215
rugilemat
opened
3 months ago
9
empty output files in dataprep stage
#214
villegmb
opened
3 months ago
3
Biological replicate
#213
AndreaYCT
closed
3 months ago
4
xpore dataprep empty output files
#212
linyan168168
closed
4 months ago
9
dataprep empty output files
#211
linyan168168
closed
4 months ago
1
Empty diffmod.table file, only header generated when running xpore diffmod after preprocessing my runs
#209
nickst85
closed
4 months ago
5
Performance Warning
#208
nickst85
closed
5 months ago
1
question about interpreting the NA value in the mod rate column
#207
lyj95618
opened
6 months ago
3
update version to 2.1.1
#205
yuukiiwa
closed
7 months ago
0
add ci
#204
yuukiiwa
closed
7 months ago
0
version 2.1.1 -- add ci and cDNA fasta bug fix
#203
yuukiiwa
opened
7 months ago
0
add ci
#202
yuukiiwa
closed
7 months ago
0
fixing bug for Ensembl cDNA fasta
#201
yuukiiwa
closed
7 months ago
0
Revert "fixing bug for Ensembl cDNA fasta"
#200
yuukiiwa
closed
7 months ago
0
Revert "Create CODE_OF_CONDUCT.md"
#199
yuukiiwa
closed
7 months ago
0
Revert "Update __init.py__ to match 2.1"
#198
yuukiiwa
closed
7 months ago
0
Revert "Create CONTRIBUTING.md"
#197
yuukiiwa
closed
7 months ago
0
add ci
#196
yuukiiwa
closed
7 months ago
0
add ci
#195
yuukiiwa
closed
7 months ago
0
Revert "test add ci"
#194
yuukiiwa
closed
7 months ago
0
test add ci
#193
yuukiiwa
closed
7 months ago
0
Create CONTRIBUTING.md
#192
jonathangoeke
closed
7 months ago
0
Create CODE_OF_CONDUCT.md
#191
jonathangoeke
closed
7 months ago
0
fixing bug for Ensembl cDNA fasta
#190
loganylchen
closed
7 months ago
3
Can Xpore detect 5mC RNA modification
#189
keenhl
closed
8 months ago
2
concern about the error in the dataprep step
#188
lyj95618
closed
4 months ago
1
Concern about the P value!
#186
M-Chi-1
opened
9 months ago
1
question about replicates
#185
huawen-poppy
closed
7 months ago
1
error in datapre step
#184
huawen-poppy
opened
9 months ago
7
per-read modification scores or assignments for each position
#183
adalisan
opened
11 months ago
0
Three questions about xpore
#182
iamwjy1
opened
11 months ago
0
Can Xpore detect RNA modification other than m6A?
#181
fulaibaowang
opened
1 year ago
2
diffmod.table missing majority of positions
#180
JannesSP
opened
1 year ago
5
running into problem with Xpore after merging multiple .fastq and .bam files from same Nanopore run
#179
annapopova-scripps
opened
1 year ago
7
The scope of application of the xpore
#178
zzf77
opened
1 year ago
1
Empty diffmod.table file, only header generated when running xpore diffmod with preprocessed files, not able to reproduce the data
#177
kwonej0617
opened
1 year ago
7
diffmod.table and eventalign.index contain only header
#172
dietvin
closed
1 year ago
4
Which of criteria use for get the top significant 1,452 positions?
#171
thadasps
opened
1 year ago
0
dataprep error and empty output files
#170
Michael-m6A
opened
1 year ago
27
diffmod output files empty
#169
anaesco
closed
8 months ago
4
output of diffmod and xpore post processing
#168
rezarahman12
closed
1 year ago
4
about Homo_sapiens.GRCh38.cdna.ncrna_wtChrIs_modified
#167
rezarahman12
opened
1 year ago
0
Diffmod and yml file outcome issue
#166
Michael-m6A
closed
1 year ago
3
Request for xpore result of HEK293T-rep1
#165
rezarahman12
opened
1 year ago
2
"SettingWithCopyWarning" then xpore stops, when running xpore dataprep using the demo dataset....
#163
sbridgett
closed
8 months ago
1
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