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Hello, I am a BI graduate student in South Korea dealing with ONT long-read sequencing data for the first time.
I am working on a project to align and analyze targeted long-read sqeuencing data, and…
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**User story**
As an SSR I would like to see sample runs that have failed Data QC in the report so that the failure rates are easily visible.
**Who are the primary contacts for this story**
Rich C
*…
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Hi @huangyh09,
First of all, huge thanks for developing Vireo!
I've been testing it using a synthetic pool (3 donors), and I've noticed a high number of unassigned cells, particularly from one don…
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There are some issues with this training that I collect here to fix step-by-step.
* In the preprocessing part, all fastq outputs go into multiQC, but since multiQC only shows one output for identical…
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Hello, Dr. He. Sorry to bother you again.
I already knew that SEVtras would work with single cell RNA sequencing data produced by the 10x genomics chromium , which is based on droplet sequencing, but…
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This is regarding the quote obtained for WGBS sequencing (#1732) .
For this sequencing run we plan to include DNA from a few different Pacific cod tissue types (blood, fin, jawbone). The blood and…
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Hello again!
I want to process the sequencing data obtained by Croce _et al_ in **"Phage display profiling of CDR3β loops enables machine learning predictions of NY-ESO-1 specific TCRs"** with TRUS…
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Good morning,
I am currently using Freebayes ( v1.3.6) to identify variants from Oxford Nanopore sequencing data. However, I have noticed that not all the expected SNPs and insertions are being det…
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Hello,
I'm analysing single-cell full-length RNA sequencing data. I would like to perform an analysis on alternative splicing exons, which has been mentioned multiple times in your research group's…
weib3 updated
3 weeks ago
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## Problem Statement
Data managers should have the ability to update and delete records from Metamist. Currently, there is limited ability to update records, and where there is, it's mostly confined …