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Hello,
I believe there is a bug in the latest singularity recipe. While my experience with singularity is limited, I believe that in line 39 under %files, some files and directories are being attem…
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Hello, I am trying to run Braker using the provided Docker image on Singularity. However, When I try the `test.sh` files I am getting the following error:
```
ERROR in file /opt/BRAKER/scripts/bra…
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Running into an issue when processing the test data set when pulling a singularity image with a singularity profile and an additional slurm profile:
`ERROR ~ Error executing process > 'SCATACPIPE:…
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Hello,
I’ve been working on creating an original miRNA library for dogs. I successfully generated the necessary FASTA files, but I encountered an issue when attempting to install miRge_build locall…
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# Short Description of the issue
When applying an image like alpine, the singularity fails to run because it does not know it is a docker image.
## Environment
- Operating System: L…
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### Get the docker image with R libraries ready for running bowerbird
I pull the rocker-gdal-dev-python image from docker hub with this
```
module load singularity/4.1.0-slurm
singularity pul…
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Dear Author,
Thank you for creating this software. I appreciate your efforts in providing the Singularity image for easier use by other users. However, I encountered some issues while trying to downl…
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Hi,
I met a bug when processing the raw sequencing. fastq snATAC-seq data. The bug is that the Singularity image failed to be pulled to the Cache in the set repository. I can pull it manually, bu…
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### Operating System
macOS
### Other Linux
_No response_
### Workflow Version
v23.04.3
### Workflow Execution
Command line (Cluster)
### Other workflow execution
_No response_
### EPI2ME Ver…
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**Hi,
Thank you for your great work.
I run the pyscenic ctx in singularity, and encountered an error as below**
![image](https://github.com/user-attachments/assets/46157163-4aaf-4ae2-abe7-776451591…