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Several scientists from UCL team (Hadia Almahli) and DLS team (Jasmin Aschenbrenner and Daren Fearron) carried out multiple curations for the various sets of merged compounds (1500 compounds) propose …
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consider combining structural biology with antibody design: https://www.bu.edu/computationalimmunology/files/2018/06/AntibodyStructure2018SummerSchool.pdf
seems to be a subset of the problem.
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The commas in the department name breaks the JSON parsing. The current patch is to remove the commas in the professor notecards to `BBE: Biochemistry Structural and Molecular Cell Biology`. Instead, t…
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Make a cheap model of water placement (Monte Carlo?). This could build off of a routine in openmm that places water and removes them if they are too close (a type of rejection sampling).
https://gi…
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code :
protein_description = struct.getValue('pdbx_descriptor')
protein_description = protein_description.replace('\n', ' ')
protein_description = protein_descri…
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Hi, I was trying to get TensorMol to work but i can't seem to figure out why. I followed the instructions and tried to run the sample script "python3 test_tensormol01.py" but i seem to get the error m…
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[Ruiter, Anita de, and Chris Oostenbrink. “Advances in the Calculation of Binding Free Energies.” *Current Opinion in Structural Biology* 61 (2020): 207–12.](https://doi.org/10.1016/j.sbi.2020.01.016)
cramg updated
3 years ago
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Currently we have a high level of the IA facets at https://embl-design-language.github.io/Springboard/information-architecture/#facet-structure-and-categories
They are:
```
1. Who
- people
…
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The goal of the Gabriella Miller Kids First Pediatric Research Program (Kids First) is to help researchers uncover new insights into the biology of childhood cancer and structural birth defects, inclu…
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Create a tagger pipeline of OA concepts that can be easily used in other DS.