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Hello, I am new to the field and have a potentially basic question. I would like to know if a group of antibodies bind to a particular DNA sequence. Is RoseTTAFold2NA able to model antibody structure …
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# Context
The required structure for benchmark predictions can vary based on the number of test sets _and_ tasks in a given benchmark. It is necessary that when users supply their predictions for e…
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Regarding the issue of de novo gene structure prediction, it seems that there is no model for watermelon in the Augustus software. Did you build the model yourself? How can one construct a reasonable …
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thank you for your outstanding jobs!
but i found a problem that, when i run the prediction with pdb file generated from different AF version, that result is not that robust.
for example
POU5F1 TF:
…
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# Context
Benchmarks can be created on Polaris which contain N number of tasks and N number of test sets. This introduces 4 classes of benchmarks which Polaris must support during the evaluation of u…
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I installed localcolabfold and copied HighFold git repo into my localcolabfold.
So that my localcolabfold git repo looks as
![Screenshot 2024-06-25 at 5 29 04 PM](https://github.com/hongliangduan/…
kimdn updated
1 month ago
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I tried to predict two RNA strands with cas9 (PDB ID: 4OO8).
However, RNA structures were crashed like fragment of skein.
Not only for this, but also same RNA structure were simulated without protei…
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Dear Danny
Interesting new method. I think this github repo could benefit from a more elaborate user guide in the README, i.e. step-by-step how to go from a .pdb file to DDG predictions - this is …
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## 論文リンク
https://www.nature.com/articles/s41586-021-03819-2
(Supplementary Information も同ページにリンクがある)
## 公開日(yyyy/mm/dd)
2021/07/15
## 概要
タンパク質の構造予測コンペである CASP14 において他チームを圧倒した精度を達成した AlphaFol…