-
It would be useful for RF coil simulations (and other applications) if conductivity and permittivity were assigned to each compartment. These parameters vary with frequency so we might want to make b…
-
Hi, you've done a fantastic work!
I want to use your scRNA data as reference, but the rds.gz file in [GSE264407] seemed to be broken up, could you share me the good one?
-
Hello,
For Xenium 5k , there are two tissue sections in one capture area . I need to analyze every tissue section separately with Seurat.
So could you please tell me how spli…
-
Send Jessie list of up/down regulated homeobox genes
should be species | tissue | homeobox type | gene name
1. get homeobox genes per species (separate files for each type)
2. run find_common.py (/bl…
-
Hi, I want to assemble a final set of transcripts from multiple tissues, But I have a question. Should I first assemble transcripts for each sample, then merge the transcripts from the same tissue? Or…
-
I would propose in the language and notation to distinguish explicitly between two different types of indicator concentration, which you could call "concentration" and "tissue concentration". Both are…
-
### Description
Population module tissue masking and atlases sometimes creates an error when mask and tissue input doesn't match. This should be catched and correctly reported. And not crashing the…
-
**Describe the bug**
Currently, mehari does not annotate tx on the MT chromosome.
```
curl 'http://mehari:8080/seqvars/csq?genome_release=grch37&chromosome=MT&position=73&reference=A&alternati…
-
**Preferred term labels:**
- [ ] antimesosalpinx
- [ ] mesosalpinx epithelium
- [ ] antimesosalpinx epithelium
- [ ] mesosalpinx muscularus
- [ ] antimesosalpinx muscularus
**Synonyms**
a…
-
Aim: when working with tissue data often large parts of an acquired image constitute background which is not relevant for later processing. These regions should be masked from the input to limit the a…