-
When I try to search for all DNA-binding transcription factors
this annotation is the first in the list
URS00001B341F_9606 | Homo sapiens (human) hsa-miR-27a-5p | | negative regulation of NF-k…
-
> ... transcription factor motif analysis was carried out with the FIMO package, with a p-value threshold of 0.001. A total of 614 human transcription factor binding motifs from the HOCOMOCO database …
-
https://github.com/geneontology/go-annotation/issues/2207
create a new rule
DNA-binding transcription factor activity (GO:0003700) should NOT be also annotated to catalytic activity (GO:000382…
-
Hello,
According to our rules not to capture specific gene products, I think those terms should be obsoleted:
Number EXP annotations | Term
-- | --
10 | vitamin D receptor binding
39 | thyr…
-
One of these seem to be wrong
because
RNA polymerase III complex
and
DNA-binding transcription factor
should not co-occur
PF3D7_0206600 | transcription factor, putative | | RNA po…
-
We need to pull a series of data to inform which genes to look for variants in.
There is a[ google doc here](https://docs.google.com/spreadsheets/d/1yX-5sfrC3vrahf4_k7-5rl4Oqzm853ollIMmUo1PTc0/edit…
-
http://doi.org/10.1371/journal.pcbi.1005403
> Understanding the cell-specific binding patterns of transcription factors (TFs) is fundamental to studying gene regulatory networks in biological syste…
-
Accession: SO:0001668
Synonym: (add) promoter proximal region
Def: DNA segment that ranges from about -250 to -40 relative to +1 of RNA transcription start site, where sequence specific DNA-binding tr…
-
From https://github.com/geneontology/geneontology.github.io/issues/267#issuecomment-754567359 from @pgaudet :
Comment 1: I think the examples are wrong here ?
Example 1 : sequence specific DNA b…
-
Following terms are request for supporting annotation of Beta Cell Genomics studies.
DNA methylation profiling by ChIP-chip assay
epigenetic modification assay
transcription profiling by MPSS assa…