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Hi,
I tried to use the markdown published on https://ropensci.org/blog/2019/09/06/ucscxenatools-surv/
This is what happens:
merged_data = tibble(sampleID = names(KRAS),
…
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Dear UCSC Xena Support Team,
I am writing to report some issues encountered following the recent update to the UCSC Xena platform. Notably, the entire QuickPanCan analysis module, previously locate…
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https://shixiangwang.github.io/home/en/post/ucscxenatools-201908/
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https://shixiangwang.github.io/home/en/tools/ucscxenatools-api/
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I have had this issue in the past ([see zenodo file](https://zenodo.org/deposit/126065/)) and it looks like the current PANCAN_mutation file from xena has less samples and less columns than a previous…
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this page does not load:
https://xenabrowser.net/datapages/?dataset=WGBS%2Ftcga.WGBS.xena&host=https%3A%2F%2Fatacseq.xenahubs.net&removeHub=https%3A%2F%2Fxena.treehouse.gi.ucsc.edu%3A443
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React dev toolbar is not showing in Firefox developer edition and neither in chrome
Note: I have previously extensively used it in other projects and its working on the live production site of ucsc…
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On staging:
![Screen Shot 2020-06-15 at 4 35 04 PM](https://user-images.githubusercontent.com/13877333/84715748-433e5d00-af26-11ea-89bc-86b0827e2aca.png)
On production:
![Screen Shot 2020-06-15…
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to enable selection of features across datasets, cohorts, etc.
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I've noticed that some gene names have been converted to dates in `PANCAN_mutation` ([version info](https://github.com/dhimmel/cancer-data/blob/ffe66ab26000379adcd7138b8ff39920d4692ef1/download/PANCAN…