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I'm trying to train your model on the VG Dataset to reproduce the results. But I could not find the source for these files : VG-SGG-train.h5、VG-SGG-test.h5、VG-SGG-val.h5 in [lavis/configs/datasets/vg/…
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I couldn't find the file VG-SGG-train_zs_pred.h5/VG-SGG-train.h5 in the download link .Is this file the same as 'VG-SGG-with-attri.h5'? Or is VG-SGG-train_zs_pred.h5/VG-SGG-train.h5 a dataset file tha…
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I am trying to convert a HAL file from progressive cactus into a vg graph for structural variant calling using vg. Here are the steps I have used
```
hal2vg --refGenomes PWN --noAncestors --h…
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As business owners of VT, MT and aftermarket brands I want to have a clean backlog with updated and validated tickets so that the backlog remains relevant with work to be planned in the coming sprints…
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Hey guys, thanks for the software.
I was following the tutorial for mapping long reads and calling SV.
All good for the first part, but I noticed that when I was launching the vg pack using the .gbz…
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**1. What were you trying to do?**
I want to convert a gbz pangenome graph (created using cactus-pangenome) into xg format.
```
vg convert -x canidpg.gbz > canidpg.xg
```
**2. What did you wa…
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### For all branches based on main
In FLHET_compiled.py,
in
_362_ def SetInlet(...):
...
_368_ U_ghost[0] = (mdot - M * P_In[1] * P_In[2] **/ VG**) / (A0 * VG)
…
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**1. What were you trying to do?**
Dear vg team,
Thank you for the great program.
FYI,
minigraph v0.21 (https://github.com/lh3/minigraph)
vg v1.56.0 (https://github.com/vgteam/vg)
vcf…
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I have my node up and running (v1.110.3) and I’m using the built in /metrics endpoint. The issue I’m seeing is duplicate metrics. TSDB can't add metrics with identical timestamps, names & labels but…
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**1. What were you trying to do?**
Run `vg call` to genotype sample
**2. What did you want to happen?**
Output a valid VCF
**3. What actually happened?**
The alternative allele is m…