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Ghommal and Duradel probably also got varbits like Nieve after WGS. Preferably they'd be added to this plugin with some config options to enable/disable.
Edit: I think some other npcs like Turael a…
YvesW updated
2 weeks ago
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We are utilizing T1K for HLA subtyping, but we had a few questions. For some of our samples, we have both WGS and RNA-seq, so in this case, is there a preference on what we should use? At first, we as…
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# 武功山游记 · 🍊桔仔的博客
因为山就在那里
[https://gatzai.github.io/500-blogs/blogs/2024/wgs/](https://gatzai.github.io/500-blogs/blogs/2024/wgs/)
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There are 90 lines of metadata about the `wgs:` ontology.
Having definitions of external **terms** you use is good, so as to make ERA a self-contained ontology.
But copying the metadata of external …
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Hi @fmazzarotto. Any chance you've generated a similar mapping for the recent UKB 500K WGS release?
Thanks,
David
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Split of work:
- WG1 - Connectivity
- WG3 - Customer Data (new)
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The pipeline looks like it is optimized for processing imputed vcf data from UMICH or TOPMed imputation server which generates a DS field. Is is possible to run the pipeline on GATK WGS sequencing …
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This was posted by an external user:
I am harmonizing WGS data for the GREGoR consortium using the WGS single sample workflow (in dragen_mode) on AnVIL. I've hit a parsing error when reprocessing …
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Using a snippet from [the example](https://schemas.opengis.net/ogcapi/edr/1.1/openapi/examples/collection.json) collection metadata on schemas.opengis.net:
```json
"position": {
…
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Hello,
Thanks for this amazing tool.
Any recommendation on the best approach to take when one has multiple paired-end fastq files for the same sample? An example is the 1000 genome 30X WGS file…