AFM-SPM TopoStats issues

AFM-SPM / TopoStats

An AFM image analysis program to batch process data and obtain statistics from images

https://afm-spm.github.io/TopoStats/

GNU Lesser General Public License v3.0

60 stars 11 forks source link

issues

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Refactor pipeline to use grain crop dictionaries

#1022 SylviaWhittle opened 3 days ago
0
Expand CITATION.cff

#1021 ns-rse opened 5 days ago
1
Update paper linked under Publications in README.md

#1020 ns-rse opened 5 days ago
0
DOI for versioned releases

#1019 ns-rse opened 5 days ago
0
[feature] : Tip broadening measurement

#1018 SylviaWhittle opened 5 days ago
1
ci: group dependabot github-actions updates

#1017 ns-rse closed 5 days ago
0
Build(deps): Bump codecov/codecov-action from 4 to 5

#1016 dependabot[bot] closed 6 days ago
1
Build(deps): Bump actions/add-to-project from 0.5.0 to 1.0.2

#1015 dependabot[bot] closed 6 days ago
0
ci: Adds pygrep-hooks and fixes errors

#1014 ns-rse closed 6 days ago
0
config: Removes target-version from ruff configuration

#1013 ns-rse closed 6 days ago
0
dependabot for GitHub Actions

#1012 ns-rse closed 6 days ago
0
style: Changes prettier mirror used by pre-commit

#1011 ns-rse closed 6 days ago
0
Curvatrure entry point

#1010 ns-rse opened 6 days ago
0
Splining entry point

#1009 ns-rse opened 6 days ago
0
[feature] : Follow PixelQuest guidelines

#1008 ns-rse opened 6 days ago
0
RF002: Target version must be set. - You have both Ruff's target-version and project.requires-python. You only need the latter.

#1007 ns-rse closed 6 days ago
0
PC180: Uses a markdown formatter. - Use https://github.com/rbubley/mirrors-prettier instead of https://github.com/pre-commit/mirrors-prettier in .pre-commit-config.yaml

#1006 ns-rse closed 6 days ago
0
PC170: Uses PyGrep hooks (only needed if rST present) - Must have https://github.com/pre-commit/pygrep-hooks in .pre-commit-config.yaml

#1005 ns-rse closed 6 days ago
0
doc: Reduce Python version to 3.11 in .readthedocs.yaml

#1004 ns-rse closed 6 days ago
0
Feret work

#1003 ns-rse opened 6 days ago
0
tests(processing): Update regression test targets to include dna width

#1002 ns-rse closed 1 week ago
0
[Bug]: docs/data_dictionary.md does not reflect current output

#1001 ns-rse opened 1 week ago
0
ci: Adds a Pull Request template

#1000 ns-rse closed 1 week ago
0
Added average grain width measurement to disordered tracing

#999 tcatley opened 1 week ago
6
Remove references to run_topostats from documentation

#998 ns-rse closed 1 week ago
0
update readme.md with new swiss army knife processing order

#997 MaxGamill-Sheffield closed 1 week ago
0
refactor(run_modules): Move common setup to individual functions

#996 ns-rse closed 1 week ago
3
package: Unpin topoly version

#995 ns-rse closed 1 week ago
4
Unpin dependency on topoly==1.0.2

#994 ns-rse closed 1 week ago
1
Add documentation for flattening and grains

#993 SylviaWhittle closed 1 week ago
2
Hariborings vetting to main

#992 SylviaWhittle closed 1 week ago
5
[pre-commit.ci] pre-commit-autoupdate

#991 pre-commit-ci[bot] closed 1 week ago
0
[feature] : Calculate width of DNA

#990 SylviaWhittle opened 3 weeks ago
0
Document how to add functionality and modules to the entry points

#989 ns-rse opened 3 weeks ago
0
wip: Adding all configuration options as arguments

#988 ns-rse closed 1 week ago
1
[feature] : Google Collab notebooks

#987 SylviaWhittle opened 3 weeks ago
1
Use new skan.summarize(separator="_")

#986 ns-rse opened 3 weeks ago
2
refactor(entry_points): Removing legacy entry points

#985 ns-rse closed 3 weeks ago
1
Combining update_config() and merge_mappings() into a single function

#984 ns-rse opened 4 weeks ago
0
Optimized Area thresholding

#983 AuroVarat opened 1 month ago
2
fix: Remove duplicate modification of TensorFlow log level

#982 ns-rse closed 1 month ago
0
Add support for partial config files

#981 SylviaWhittle closed 2 weeks ago
9
feature: Print 'art' above completion message

#980 ns-rse closed 1 month ago
1
chore: Adds fair-software.eu badge to README.md

#979 ns-rse closed 1 month ago
0
tests(disordered_tracing): Bulks out missing unittests

#978 ns-rse closed 1 month ago
0
tests(utils): parameterise test_create_empty_dataframe()

#977 ns-rse closed 1 month ago
0
General Cleanup and Following the Better Tracing Merger

#976 MaxGamill-Sheffield closed 1 month ago
7
Summary plots are broken

#975 ns-rse closed 1 month ago
0
Add basic curvature

#974 SylviaWhittle closed 4 days ago
7
Fixes None tracing outputs attempted to be concatenated

#973 MaxGamill-Sheffield closed 1 month ago
3