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AllenInstitute
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mindscope_utilities
Utilities for loading, manipulating and visualizing data from the Allen Institute Mindscope program
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output_sampling_rate None when interpolate is False
#70
jkim0731
closed
1 year ago
0
changing names from event to stim,
#69
jkim0731
closed
1 year ago
0
Deprecation warnings
#68
DowntonCrabby
closed
1 year ago
1
fixing test error
#67
yavorska-iryna
closed
1 year ago
3
calculate responses before and after changes and omissions
#66
jkim0731
closed
1 year ago
1
Getting stimulus_presentations with images > 3 flashes from the change and omission
#65
jkim0731
closed
1 year ago
0
update documentation for get_pupil_data
#64
matchings
closed
1 year ago
0
Update issue templates
#62
DowntonCrabby
closed
1 year ago
0
[WIP] update stimulus_response_df code
#61
matchings
closed
1 year ago
1
change add_trials_id_to_stimulus_presentations
#60
jkim0731
closed
1 year ago
0
add_trials_id_to_stimulus_presentations does not work as supposed
#59
jkim0731
closed
1 year ago
0
updates to stimulus_response_df and annotation of stimulus_presentations
#57
matchings
closed
2 years ago
1
provide output_sampling_rate to get_stimulus_response_df
#54
matchings
closed
1 year ago
0
create function add_pupil_width_to_stimulus_presentations
#53
matchings
closed
1 year ago
0
update annotate_stimuli
#51
matchings
closed
1 year ago
0
add significance computation to get_stimulus_response_xr
#50
matchings
closed
1 year ago
0
provide window for mean response calculation to get_stimulus_response_xr
#49
matchings
closed
1 year ago
0
eliminate redundancy in etr inputs t_before, t_after, t_start, t_end
#47
matchings
closed
1 year ago
0
fix interpolation
#46
matchings
closed
3 years ago
0
add_licks_to_stimulus_presentations does not need a time_window input parameter
#45
matchings
closed
1 year ago
0
upgrading to version 0.1.9
#44
yavorska-iryna
closed
3 years ago
0
making the original index column more flexible
#43
yavorska-iryna
closed
3 years ago
0
adapt get_stimulus_response_df to work with behavior timeseries
#42
matchings
closed
1 year ago
0
adding `stimulus_presentation_id_column`
#41
yavorska-iryna
closed
3 years ago
0
Adding stim pres ids
#40
yavorska-iryna
closed
3 years ago
0
Error during installation related to `/tmp/pip-build-yavzhz/simpleitk/`
#39
yavorska-iryna
closed
1 year ago
0
removing df
#38
yavorska-iryna
closed
3 years ago
0
Adding functions to calculate and plot d' and response matrices
#37
dougollerenshaw
closed
3 years ago
1
adding flake8 config file
#36
dougollerenshaw
closed
3 years ago
0
make inputs to functions consistent with dataset attribute names
#35
matchings
closed
3 years ago
1
Adding more utilities functions
#34
yavorska-iryna
closed
3 years ago
0
Add shifting to etr
#33
dougollerenshaw
closed
3 years ago
0
add columns to stimulus_presentations
#32
matchings
closed
3 years ago
0
forgot to remote default values from get_stimulus_response_xr in df
#31
yavorska-iryna
closed
3 years ago
0
fixing missed mislabeled column
#30
yavorska-iryna
closed
3 years ago
0
add a column with `stimulus_presentation_id` to the df outputted by `mindscope_utilities.event_triggered_response()`
#29
yavorska-iryna
closed
1 year ago
0
Adding response df
#28
yavorska-iryna
closed
3 years ago
3
adding additional time arguments to event_triggered_response
#27
dougollerenshaw
closed
3 years ago
0
changing the sign of `t_before` input variable in `event_triggered_response()`
#26
yavorska-iryna
closed
3 years ago
2
update time array method to ensure desired frequency
#25
dougollerenshaw
closed
3 years ago
2
error when using "wide" format in event_triggered_response()
#24
yavorska-iryna
closed
3 years ago
1
event_triggered_response time diff does not match expected sampling rate
#23
dougollerenshaw
closed
3 years ago
3
renaming repo from "mindscope_utilities" to "visual_bahavior_utilities"
#22
yavorska-iryna
closed
2 years ago
1
Add "reward_rate" to trials table
#21
yavorska-iryna
closed
1 year ago
0
moving a few response processing functions to utilities
#20
yavorska-iryna
closed
3 years ago
7
Make cols categorical
#19
dougollerenshaw
closed
3 years ago
0
Memory inefficiencies when building tidy neural dataframe
#18
dougollerenshaw
closed
3 years ago
2
Resolving issue #14: event_triggered_response no longer modifies the index of the data parameter
#17
seanmcculloch
closed
3 years ago
1
Resolved issue #14: event_triggered_response no longer changes the index of 'data' parameter
#16
seanmcculloch
closed
3 years ago
0
Resolving issue #14: event_triggered_response no longer modifies the index of the data parameter
#15
seanmcculloch
closed
3 years ago
0
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