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AllenInstitute
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npc_sessions
Tools for accessing and packaging data from behavior and epyhys sessions from the Mindscope Neuropixels team, in the cloud.
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`676909` different training
#69
bjhardcastle
closed
8 months ago
0
in units/electrodes tables, rename "x","y","z" as "AP","DV","ML"
#68
egmcbride
closed
7 months ago
0
Setup video analysis pipeline in codeocean
#67
bjhardcastle
opened
10 months ago
0
Add `obs_intervals`
#66
bjhardcastle
closed
8 months ago
0
Use `invalid_times` to filter intervals
#65
bjhardcastle
closed
10 months ago
1
Stream video data from s3 for simple frame grabs
#64
bjhardcastle
closed
8 months ago
0
`644866_2023-02-08` uncertain probes inserted
#63
bjhardcastle
closed
10 months ago
2
`626791_2022-08-16` duplicate barcodes
#62
bjhardcastle
closed
10 months ago
0
Assorted errors on sessions
#61
bjhardcastle
closed
7 months ago
0
error getting trials table
#60
samgale
closed
10 months ago
0
Add target and non-target bools to trials table
#59
bjhardcastle
closed
10 months ago
0
`681532_2023-10-17` missing ephys devices
#58
bjhardcastle
closed
10 months ago
4
Accommodate sessions with `context = 'none'`
#57
bjhardcastle
closed
10 months ago
1
Fix compatibility with JupyterLab on CodeOcean
#56
bjhardcastle
closed
10 months ago
1
`667252_2023-09-27` long frame intervals affecting timing
#55
bjhardcastle
opened
10 months ago
0
Add `pynwb.ecephys.FeatureExtraction()` for storing PCs
#54
bjhardcastle
opened
11 months ago
0
`662983_2023-05-16` errored: `FileNotFoundError("Expected a single NI-DAQmx folder to exist ...`
#53
bjhardcastle
closed
10 months ago
2
Sound alignment failing
#52
bjhardcastle
closed
10 months ago
2
`626791_2022-08-17` errored: `ValueError('Could not determine sound type for trial 3')`
#51
bjhardcastle
closed
10 months ago
1
`626791_2022-08-15` errored: `ValueError('Could not determine sound type for trial 5')`
#50
bjhardcastle
closed
10 months ago
1
Sessions missing units
#49
egmcbride
closed
10 months ago
3
644864_2023-02-02 missing probes
#48
egmcbride
closed
10 months ago
3
Refactor running speed util to use vsync timing
#47
bjhardcastle
opened
11 months ago
0
Adjust unit metrics plots
#46
bjhardcastle
opened
11 months ago
2
Create unit metrics with only "good" units
#45
bjhardcastle
opened
11 months ago
0
Create drift maps from scratch
#44
bjhardcastle
opened
11 months ago
1
Surface-channels recording upload
#43
bjhardcastle
closed
7 months ago
4
Clarify whether `get_sessions` kwargs are for filtering or for config
#42
bjhardcastle
closed
7 months ago
1
Accessing units
#41
bjhardcastle
opened
11 months ago
4
get waveform sd
#40
bjhardcastle
closed
11 months ago
0
@arjunsridhar12345 rm settings xml, use spike_interface_data.electrode_locations_xy
#39
bjhardcastle
closed
8 months ago
3
@arjunsridhar12345 look at this further - doesn't match value of `before` in metadata
#38
bjhardcastle
closed
8 months ago
0
@arjunsridhar12345 is this safe?
#37
bjhardcastle
closed
8 months ago
0
Update units to generate on-demand
#36
bjhardcastle
closed
11 months ago
0
Add CCF annotations to electrodes
#35
bjhardcastle
closed
11 months ago
0
Add a text description for each column in `performance by block`
#34
bjhardcastle
closed
11 months ago
0
Review use of script time vs estimated monitor update time for event times
#33
bjhardcastle
closed
11 months ago
1
Make opto info compatible with multiple devices
#32
bjhardcastle
opened
11 months ago
0
session 670248_2023-08-01 missing opto info
#31
egmcbride
closed
11 months ago
0
Templeton sessions
#30
bjhardcastle
closed
11 months ago
1
Speed-up importing
#29
bjhardcastle
closed
7 months ago
2
`644867_2023-02-21`
#28
bjhardcastle
opened
11 months ago
1
`628801_2022-09-20`
#27
bjhardcastle
opened
11 months ago
0
`660023_2023-08-08`
#26
bjhardcastle
closed
8 months ago
2
`668759_2023-07-13`
#25
bjhardcastle
closed
4 months ago
1
`666986_2023-08-14`
#24
bjhardcastle
closed
4 months ago
1
Add `OptogeneticSeries` and `OptogeneticStimulusSite`
#23
bjhardcastle
opened
11 months ago
0
Create `stimulus_templates`
#22
bjhardcastle
opened
12 months ago
0
Add `type` label to Waveform
#21
bjhardcastle
opened
12 months ago
1
unit quality metrics
#20
corbennett
closed
7 months ago
0
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