AllenNeuralDynamics aind-dynamic-foraging-data-utils issues

AllenNeuralDynamics / aind-dynamic-foraging-data-utils

Tools for the analysis of behavior and neural data from the dynamic foraging task

MIT License

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issues

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add the example ipynb that bowen found really useful

#61 bwtan-allen closed 14 hours ago
1
Adding documentation on basic usage in README

#59 alexpiet closed 1 week ago
2
Reorganize reward delivery times

#57 alexpiet opened 2 weeks ago
2
Have assert tests give more information about what failed

#56 alexpiet opened 2 weeks ago
0
Organize columns in df_trials to be more logically ordered

#55 alexpiet opened 2 weeks ago
1
Have Extra Rewards defined by Manual reward and AutoReward

#54 rachelstephlee opened 3 weeks ago
1
Documentation needs

#53 alexpiet opened 3 weeks ago
1
No reward trials somehow still have reward_time listed

#52 rachelstephlee opened 3 weeks ago
0
Figure out absolute time and local time set up

#51 rachelstephlee closed 2 days ago
1
Change absolute time reference to first go cue

#50 ZhixiaoSu closed 2 weeks ago
9
Absolute_time alignment error

#49 ZhixiaoSu closed 2 days ago
3
Add ses_idx column to FIB_df

#48 jasonyslee closed 4 weeks ago
1
Make pivot table tidy (tidy=false -> true)

#47 jasonyslee closed 1 month ago
0
minor: subject_id and session_date shouldnt' be object types, but strings and datetime types

#46 rachelstephlee closed 3 weeks ago
1
fip_df access should check for old NWB processing and warn users

#45 alexpiet opened 1 month ago
0
updating fip_df to use new format

#44 alexpiet closed 2 months ago
2
Adds NaN policy to event_triggered_response

#43 alexpiet closed 2 months ago
1
event_triggered_response should have nan policy

#42 rachelstephlee closed 2 months ago
0
Update alignment.py

#41 amarack closed 2 months ago
0
adding censor times

#40 alexpiet closed 2 months ago
1
adding censoring to event triggered response

#39 alexpiet closed 2 months ago
2
Add the ability to censor event triggered responses by subsequent events

#38 alexpiet closed 2 months ago
1
Update time alignment

#37 alexpiet closed 3 months ago
1
Add trial index to df_events table

#36 alexpiet closed 3 months ago
0
Trial start/stop time do not tile time

#35 alexpiet closed 3 months ago
2
switching from pivot_table to pivot

#34 alexpiet closed 3 months ago
2
adding fib dataframe

#33 alexpiet closed 3 months ago
0
Add one new NWB file for testing

#32 alexpiet closed 3 months ago
0
Add tests for nwb_utils

#31 alexpiet opened 3 months ago
0
nwb_utils.create_df_session needs to be reorganized

#30 alexpiet opened 3 months ago
0
setup auto updating version tracking

#29 alexpiet opened 3 months ago
0
Move foraging_efficiency calculations to aind-dynamic-foraging-basic-analysis

#28 alexpiet opened 3 months ago
0
Easy tool to download nwb file

#27 alexpiet opened 3 months ago
3
NWB to dataframe tools

#26 alexpiet closed 3 months ago
1
Link to test data

#24 rachelstephlee closed 3 weeks ago
2
docs: sets line length and runs linters

#23 jtyoung84 closed 4 months ago
0
Rachel updates 2

#22 jtyoung84 closed 4 months ago
0
fix: renames package and runs linters

#21 jtyoung84 closed 4 months ago
0
Update README.md

#20 rachelstephlee closed 3 months ago
0
Generation session-wise xarray for ephys data (trials x timeInTrial x unitIDs)

#19 ZhixiaoSu opened 7 months ago
0
Post hoc abnormal lick removal

#17 hanhou opened 8 months ago
1
Planning: standardized dynamic foraging analysis

#16 hanhou opened 8 months ago
11
feat(core): added event_triggered_response with testing

#11 rachelstephlee closed 3 months ago
0
Admin permissions for this repo

#10 hanhou closed 9 months ago
1
Link to planning document

#9 alexpiet opened 9 months ago
0
Function for aligning continuous variables to trial by trial events

#8 alexpiet opened 9 months ago
12
Load model output into a trials table format

#7 alexpiet opened 9 months ago
1
Table of behavior sessions and models

#6 alexpiet opened 9 months ago
1
Update tag_and_publish.yml

#5 alexpiet closed 9 months ago
0
Function that returns a table of all available sessions

#4 alexpiet opened 9 months ago
1