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Amber-MD
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pytraj
Python interface of cpptraj
https://amber-md.github.io/pytraj
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WIP - build_wheel.py
#1676
hainm
opened
2 days ago
0
DO NOT MERGE - WIP - avoid dealloc?
#1675
hainm
opened
2 days ago
0
DUMMY PR to check cpptraj cache
#1674
hainm
closed
2 days ago
1
cache netcdf-c and cpptraj
#1673
hainm
closed
3 days ago
0
Refactor actionlist.pyx
#1672
hainm
closed
2 days ago
1
Segmentation fault with cython >= 3.0
#1671
hainm
opened
3 days ago
0
DUMMY PR
#1670
hainm
closed
3 days ago
1
Python versions
#1669
hainm
closed
3 days ago
1
python versions
#1668
hainm
closed
3 days ago
0
Support numpy 2.1.0
#1667
hainm
opened
2 months ago
0
dummy PR to trigger test
#1666
hainm
closed
3 days ago
0
Abnormal coordinate values after autoimage
#1665
Serious-Huang
closed
3 months ago
1
Consider incorporating GraphVampNet into Pytraj
#1664
hainm
opened
4 months ago
0
StrEnum
#1663
hainm
closed
5 months ago
0
refactor trajectory.py
#1662
hainm
closed
5 months ago
0
AnalysisRunner
#1661
hainm
closed
5 months ago
0
pytestify
#1660
hainm
closed
5 months ago
0
WIP - CI with python-version: [3.11, 3.12]
#1659
hainm
closed
3 days ago
1
DO NOT MERGE. TESTING CI.
#1658
hainm
closed
5 months ago
0
Refactor all_actions.py (mostly beautify it)
#1657
hainm
closed
5 months ago
0
Chain ID is now a string as of cpptraj version 6.27.0
#1656
drroe
closed
5 months ago
2
Trying to pip install pytraj
#1655
FezokaTurbo
opened
6 months ago
1
pytraj not compatible with OSX-arm64 arch
#1654
xiki-tempula
opened
6 months ago
0
nh_order_parameters
#1653
keebborg
opened
6 months ago
0
How do I import pytraj?
#1652
d-beltran
closed
7 months ago
4
pmap parallel error
#1651
groponp
opened
8 months ago
6
rdf action should be able to return the raw-rdf values
#1650
DrDomenicoMarson
closed
9 months ago
7
cython: language_level : "3"
#1649
hainm
closed
9 months ago
0
pytraj segmentation fault with cython 3.0 and cpptraj commit f1d21f688de5ea5c55e650abe6efdbc352bdc613
#1648
hainm
opened
11 months ago
1
Reporting Issues with Pytraj using tutorials
#1647
PhiMykah
closed
11 months ago
28
pytraj.plot module not found
#1646
muhammadammarzahid
opened
11 months ago
2
Make binary wheel for pytraj?
#1645
hainm
opened
11 months ago
5
hbond pmap_mpi output format
#1644
Llauset
opened
11 months ago
7
Implemented "count in voxel" function
#1643
sastrys1
closed
1 year ago
4
Count in voxel
#1642
sastrys1
closed
1 year ago
0
added closest_atoms function to all_actions.py and wrote test code (WIP)
#1641
sastrys1
closed
1 year ago
8
Function to find the atoms of a given mask that appear in a region of xyz coordinate space?
#1640
sastrys1
closed
1 year ago
10
Help: error building pytraj native library when make install 91%
#1639
kinfunny
closed
1 year ago
10
test PR
#1638
hai-schrodinger
closed
1 year ago
0
ModuleNotFoundError: No module named 'pytraj.core.topology_objects'
#1637
JSurayut
closed
11 months ago
15
Fix python 3.11 test issues
#1636
drroe
closed
1 year ago
0
Fix randomizeions test
#1635
drroe
closed
1 year ago
4
metadata -> crdinfo
#1634
hainm
closed
1 year ago
0
Spurious Test Failures with Cpptraj
#1633
drroe
closed
1 year ago
9
Has anyone tried a Python 3.11 conda package build yet?
#1632
swails
closed
1 year ago
11
Try to fix some test warnings that can be errors on certain platforms.
#1631
drroe
closed
1 year ago
1
energy_decompostion throws "Fortran runtime error: Bad value during integer read"
#1630
spadavec
closed
1 year ago
1
Installation error of pytraj with pip
#1629
RajarshiRay25
opened
1 year ago
4
calculated basepair matches in pytraj
#1627
cloudella48
opened
1 year ago
2
wrong major groove calculation
#1626
cloudella48
opened
1 year ago
8
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