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AstraZeneca-Omics
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immport-galaxy-tools
Tools for ImmPort Galaxy
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Added PeacoQC
#114
mohamedm-az
opened
8 months ago
0
[WIP] Black formatting changes and warning on pop sizes
#113
pcm32
opened
1 year ago
0
Add mscorefonts as dependency for flowsom and AI
#112
pcm32
closed
1 year ago
0
Fix flowAI by avoiding file moves outside of working directory
#111
pcm32
closed
1 year ago
0
Update FlowSOMMApIndividualFCS.xml dependency to 1.16
#110
pcm32
closed
1 year ago
0
Fix R linting issues to deploy convert fcstxt to sce
#109
pcm32
closed
3 years ago
0
Autospill option for removing forbidden characters
#108
pcm32
closed
3 years ago
1
CI to GitHub actions
#107
pcm32
closed
3 years ago
1
Produce log with stderr and stdout for flow_compensate
#106
pcm32
closed
3 years ago
0
Autospill 0.2.0 plus tests
#105
pcm32
closed
3 years ago
0
Autospill and compensate tool
#104
pcm32
closed
3 years ago
0
Correct shed owner for flowtext_summary
#103
pcm32
closed
4 years ago
0
Convert_fcstxt_to_SCE new tool.
#102
emily101-gif
closed
3 years ago
1
[WIP] FCS_gate tool - fix gating
#101
emily101-gif
opened
4 years ago
0
[WIP] flowAI tool - HTML
#100
emily101-gif
closed
1 year ago
1
[WIP] FCSgatetrans tool - Detect alternative spill over matrix name
#99
emily101-gif
opened
4 years ago
0
Check fcs headers: fixes .shed for deployment
#98
pcm32
closed
4 years ago
0
Flowclr sample name
#97
pcm32
closed
4 years ago
7
[WIP] flclr_sample_name NEW tool
#96
emily101-gif
closed
4 years ago
2
FCS_scatterplot tool
#95
emily101-gif
closed
4 years ago
2
[WIP] txt diagnosis tool
#94
emily101-gif
closed
4 years ago
3
Flowsom_tree fix error codes and sets profile
#93
pcm32
closed
4 years ago
0
FCS Merge Downsample tool
#92
emily101-gif
closed
4 years ago
0
Fix issues with gcs_gate_trans
#91
twfs
closed
4 years ago
2
[WIP] Update fcs_gate_trans with differences from immport-galaxy version
#90
twfs
closed
4 years ago
1
Add scatter plot tools
#89
pcm32
opened
4 years ago
0
[WIP] Fix png on fcs_gate_trans
#88
pcm32
closed
4 years ago
1
flow_overview newer in immport Galaxy instance
#87
pcm32
opened
4 years ago
0
rearrange_columns newer in immport Galaxy instance (compared to here or on the toolshed)
#86
pcm32
opened
4 years ago
0
check_headers newer on immport-galaxy instance than here (or in the toolshed)
#85
pcm32
opened
4 years ago
0
edit_fcs_markers newer in immport-galaxy instance
#84
pcm32
opened
4 years ago
0
fcs_scatterplot tool is different in this fork to what is available in immport-galaxy github repo
#83
pcm32
opened
4 years ago
0
Tools missing or with different versions compared to immport-galaxy main repo
#82
pcm32
closed
4 years ago
2
immport-galaxy repo Get FCS headers is newer than the one installable over the toolshed
#81
pcm32
opened
4 years ago
1
fcs merge downsample tool
#80
emily101-gif
closed
4 years ago
3
getDensityPlots_text tool
#79
emily101-gif
closed
4 years ago
0
[WIP] txtdiagnosis tool
#78
emily101-gif
closed
4 years ago
0
runFlockMFI tool
#77
emily101-gif
closed
4 years ago
0
runCrossSample tool
#76
emily101-gif
closed
4 years ago
10
profileCLs tool
#75
emily101-gif
closed
4 years ago
1
getOntology tool
#74
emily101-gif
closed
4 years ago
6
getHeaders tool
#73
emily101-gif
closed
4 years ago
2
getFCSheader tool
#72
emily101-gif
closed
4 years ago
2
[WIP] getDensityPlots_text tool
#71
emily101-gif
closed
4 years ago
0
generate MFI tool
#70
emily101-gif
closed
4 years ago
0
genFlowOverview tool
#69
emily101-gif
closed
4 years ago
3
Extract pop tool
#68
emily101-gif
closed
4 years ago
0
Edit Column Headings tool
#67
emily101-gif
closed
4 years ago
1
Cross sample overview tool
#66
emily101-gif
closed
4 years ago
2
clustergrammer tool
#65
emily101-gif
closed
4 years ago
3
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