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BD2KGenomics
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cgl-docker-lib
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Update Mango to Spark 2.4.3
#292
akmorrow13
closed
5 years ago
19
Update client to v1.4
#291
jvivian
opened
5 years ago
0
Update gdc-client to 1.4
#290
jvivian
opened
5 years ago
0
updated Mango python version to py35
#289
akmorrow13
closed
5 years ago
3
updated Gencode v23 to v24 for bamQC
#288
akmorrow13
closed
5 years ago
7
BamQC Makefile fails with unknown -f flag
#287
akmorrow13
closed
5 years ago
1
Human_Homo_sapiens/hg38_GENCODE_v23_basic.bed.gz does not exist for BamQC
#286
akmorrow13
closed
5 years ago
2
updated Mango for Spark 2.3.2
#285
akmorrow13
closed
5 years ago
8
Add Treehouse bamQC (resolves #283)
#284
jvivian
closed
5 years ago
0
Add BamQC
#283
jvivian
closed
5 years ago
0
Update CutAdapt to 1.18
#282
jvivian
closed
5 years ago
0
Update CutAdapt to 1.18
#281
jvivian
closed
5 years ago
0
Fix ZeroDivisionError when no genes map (resolves #279)
#280
jvivian
closed
6 years ago
0
`gencode_hugo_mapping` fails on non-human genes
#279
jvivian
closed
6 years ago
0
issues/277 updated samtools version
#278
tpesout
closed
6 years ago
0
update samtools to 1.8
#277
tpesout
closed
6 years ago
0
Flappy Jenkins test
#276
jvivian
opened
6 years ago
0
Add GDC client (resolves #274)
#275
jvivian
closed
6 years ago
0
Add GDC-Client
#274
jvivian
closed
6 years ago
0
remove spark and scala version scripts for Mango
#273
akmorrow13
closed
6 years ago
11
Open Source License
#272
Georgehe4
opened
6 years ago
0
Update docker commands for Mango
#271
Georgehe4
opened
6 years ago
0
Mango not available on https://quay.io/organization/ucsc_cgl
#270
akmorrow13
closed
6 years ago
4
Add bigdatagenomics Mango container
#269
akmorrow13
closed
6 years ago
18
Fix hera_build import bug (resolves #267)
#268
jvivian
closed
6 years ago
1
Fix bug in Hera's index build
#267
jvivian
closed
6 years ago
0
Bump to DECA 0.1.0 (resolves #265)
#266
fnothaft
closed
7 years ago
1
Update DECA container to 0.1.0 release
#265
fnothaft
closed
7 years ago
0
Issues/263 create rtgtools image
#264
tpesout
closed
7 years ago
1
need rtg-tools container
#263
tpesout
opened
7 years ago
0
Update to latest (1.0dev100) release of snap (resolves #261)
#262
fnothaft
closed
5 years ago
1
Upgrade SNAP to 1.0dev.100
#261
fnothaft
opened
7 years ago
0
Add retry to `docker push` in jenkins
#260
jvivian
opened
7 years ago
1
Issues/258 add python to hera
#259
jvivian
closed
7 years ago
2
Add python to Hera
#258
jvivian
closed
7 years ago
0
Bump Hadoop containers to Apache Hadoop 2.7 (resolves #256)
#257
fnothaft
closed
7 years ago
1
Bump to Apache Hadoop 2.7
#256
fnothaft
closed
7 years ago
0
Add cmake (resolves #254)
#255
jvivian
closed
7 years ago
4
Make CMAKE base image
#254
jvivian
closed
7 years ago
0
Add Hera (resolves #252)
#253
jvivian
closed
7 years ago
5
Add Hera
#252
jvivian
closed
7 years ago
0
Add DECA CNV caller (resolves #250)
#251
fnothaft
closed
7 years ago
2
Add DECA
#250
fnothaft
closed
7 years ago
0
Add pizzly (resolves #248)
#249
jvivian
closed
7 years ago
0
Add pizzly
#248
jvivian
closed
7 years ago
0
latest does not exist
#247
antonkulaga
opened
7 years ago
1
Update STAR (resolves #245)
#246
jvivian
closed
7 years ago
2
Update STAR to 2.5.3a
#245
jvivian
closed
7 years ago
0
Refactor `spark-and-maven` on `apache-spark-common`
#244
fnothaft
opened
7 years ago
0
Factor apt-get commands out
#243
fnothaft
opened
7 years ago
2
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