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BICCN
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cell-locator
manually align specimens to annotated 3D spaces
https://cell-locator.readthedocs.io
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DOC: Update README and fix license link
#228
jcfr
closed
1 year ago
0
DOC: Explicitly describe license in README and documentation main page
#227
jcfr
closed
1 year ago
0
COMP: Update Slicer and VTK to workaround pthread and dl link errors
#226
jcfr
opened
1 year ago
0
Update docs
#225
jcfr
closed
1 year ago
0
Improve docs
#224
jcfr
closed
1 year ago
0
Inclusive language
#223
jcfr
closed
1 year ago
0
Refactor Documentation
#222
allemangD
closed
1 year ago
1
Update documentation
#221
jcfr
closed
1 year ago
1
Please add RRID to github and documentation pages
#220
lydiang
closed
1 year ago
0
Documentation published on readthedocs is not current
#219
jcfr
closed
1 year ago
12
Update documentation to describe annotation file format version updates
#218
jcfr
closed
1 year ago
2
Update annotation file format version
#217
jcfr
closed
1 year ago
1
DOC: Update CHANGES and user guide to describe lims-speciman-kind parameter
#216
jcfr
closed
2 years ago
0
Python Annotation Export CLI Tool
#215
allemangD
closed
1 year ago
11
ENH: Add optional lims-specimen-kind parameter
#214
allemangD
closed
2 years ago
1
change hard-coded kind parameter to default that can be overriden by a command line argument
#213
roby1kenobi
closed
2 years ago
1
Example files for library function development
#212
lydiang
closed
1 year ago
1
Unified slider directions for all brain atlases
#211
lydiang
opened
2 years ago
0
Include "how-to" use the UI with pictures in the doc
#210
lydiang
closed
1 year ago
0
208 structure info
#209
allemangD
closed
2 years ago
2
Add structure id and acronym to JSON
#208
wbwakeman
closed
2 years ago
6
Is there a difference between a LIMS json blob those save directly to file?
#207
lydiang
opened
2 years ago
1
DOC: Document double-click action to rename annotations.
#206
allemangD
closed
2 years ago
0
Missing changelog entries for recent PRs
#205
allemangD
closed
2 years ago
0
BUG: Don't show exit confirmation when file (or LIMS specimen) is unchanged.
#204
allemangD
closed
2 years ago
0
DOC: Update expected Slice Offset values.
#203
allemangD
closed
2 years ago
0
Unintuitive Annotation Numbering
#202
allemangD
opened
2 years ago
0
Document that annotations can be renamed.
#201
allemangD
closed
2 years ago
0
Renaming annotation should update markup labels
#200
allemangD
opened
2 years ago
0
Toggle rendering of markup labels.
#199
allemangD
opened
2 years ago
0
ENH: Cell Locator 0.2.0
#198
allemangD
closed
2 years ago
0
Update qa checklist
#197
allemangD
closed
2 years ago
0
Add support for working with new atlases
#196
jcfr
opened
2 years ago
1
Simplify and harden the annotation file format.
#195
allemangD
opened
2 years ago
2
DOC: Update changelog
#194
allemangD
closed
2 years ago
0
Update CHANGES file
#193
jcfr
closed
2 years ago
0
Update QA checklist to capture identified regression
#192
jcfr
closed
2 years ago
0
Make Edit the default interaction mode.
#191
allemangD
opened
2 years ago
0
FIX: Changing ontology resets orientation of Slice view.
#190
allemangD
closed
2 years ago
0
FIX: GUI desync with multiple annotations
#189
allemangD
closed
2 years ago
0
FIX: Annotation initialization should trigger update
#188
allemangD
closed
2 years ago
0
FIX: Clean up markups on scene clear.
#187
allemangD
closed
2 years ago
0
Program cannot run on your PC
#186
wbwakeman
closed
2 years ago
1
New point annotation when loading annotations
#185
wbwakeman
closed
2 years ago
0
Polyline annotation loaded as Spline
#184
wbwakeman
closed
2 years ago
0
Remove Measurements from JSON output
#183
allemangD
closed
3 years ago
1
Error reading point annotation
#182
wbwakeman
closed
2 years ago
23
Add Conversion script
#181
allemangD
closed
3 years ago
1
When drawing a second annotation, annotation thickness resets to default eventhough the UI shows the righ value
#180
lydiang
closed
2 years ago
0
When drawing a second annotation, annotation type defaults to Spline eventhough the UI shows Polyline is selected
#179
lydiang
closed
2 years ago
1
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