BackofenLab IntaRNA issues

BackofenLab / IntaRNA

Efficient target prediction incorporating accessibility of interaction sites

https://backofenlab.github.io/IntaRNA/

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issues

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IntaRNA seedTQ triggers non-complementary base pair error using dot-bar-notation

#220 Tim15-tech closed 2 weeks ago
5
IntaRNAsTar Exception raised

#219 meichelman opened 4 months ago
2
IntaRNA --version does not reflect the installed conda package version?

#218 ChristianRohde closed 4 months ago
4
Basepair probs

#217 martin-raden opened 5 months ago
0
Conda command line and web based do not show the same output result

#216 paolabc closed 4 months ago
2
BUGFIX accFile loading for sequence subsets

#215 martin-raden closed 10 months ago
0
[MS WSL] file output for longer target lists crashes

#214 martin-raden opened 10 months ago
0
enable sequence subsetting when accessibilities are read from file

#213 martin-raden closed 10 months ago
0
--outOverlap=N might be buggy..

#212 martin-raden opened 11 months ago
0
[R|python] CSV input wrapper call script

#211 martin-raden opened 11 months ago
0
Update README.md

#210 teresa-m closed 1 year ago
0
Exception related to pf_scale

#209 AMA-cs closed 1 year ago
5
Segmentation fault (core dumped)

#208 AMA-cs opened 1 year ago
1
Attaching IntaRNA docker container to VS Code

#207 olive004 closed 1 year ago
2
Install error: /usr/bin/ld: -f may not be used without -shared

#206 caochch closed 1 year ago
9
Make sure program works

#205 Kalmasi2807 closed 2 years ago
3
Source compile error

#204 anselmic closed 2 years ago
4
scalebar issuses

#203 Sububioinfo closed 2 years ago
2
Vienna package not found

#202 Cold7 closed 2 years ago
4
Update ChangeLog

#201 martin-raden closed 2 years ago
1
v2.3.2

#200 martin-raden closed 2 years ago
5
v2.3.2

#199 martin-raden closed 2 years ago
0
IntaRNAhelix parameters

#198 golendraite closed 2 years ago
2
intaRNA API in python

#197 ShaniCohen closed 2 years ago
2
Reg: Prediction of miRNAs targets using 3' UTRs

#196 harish0201 closed 2 years ago
1
Etotal CSV output with SHAPE data

#195 martin-raden opened 3 years ago
0
bug with predefined single-bp seed

#194 martin-raden closed 3 years ago
2
[WIP] Replace travis CI with GitHub actions

#193 simonbray closed 2 years ago
3
configure: check for boost -mt libs

#192 martin-raden opened 3 years ago
0
v3.2.1

#191 martin-raden closed 3 years ago
0
outnolp bug

#190 martin-raden opened 3 years ago
0
Multiple output formats per one run

#189 trachtok opened 4 years ago
1
[doc] extend subopt discussion

#188 martin-raden opened 4 years ago
0
genome-wide sRNA target prediction

#187 StephenLi55 closed 4 years ago
3
replace min seq length check with warning

#186 martin-raden opened 4 years ago
0
IntaRNAplot (JavaScript, Python, ..)

#185 martin-raden opened 4 years ago
2
IntaRNAeval (C++)

#184 martin-raden opened 4 years ago
1
CopomuS fix

#183 martin-raden closed 4 years ago
0
make copomus part of dist

#182 martin-raden closed 4 years ago
0
v3.2.0

#181 martin-raden closed 4 years ago
0
Copomus

#180 martin-raden closed 4 years ago
1
v 3.1.5

#179 martin-raden closed 4 years ago
0
v3.1.4

#178 martin-raden closed 4 years ago
0
v3.1.3

#177 martin-raden closed 4 years ago
0
v3.1.2

#176 martin-raden closed 4 years ago
0
outNoLP bug

#175 martin-raden closed 4 years ago
1
nice to have: --out outXXXPerQ|T:...

#174 martin-raden opened 4 years ago
0
--outSep=";" to specify separator for output table data

#173 martin-raden closed 5 years ago
2
v3.1.1

#172 martin-raden closed 5 years ago
0
ncRNA-NCBI prediction

#171 rscotti closed 5 years ago
3