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BlanchetteLab
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HIFI
Hi-C Interaction Frequency Inference (HIFI): High-resolution estimation of DNA-DNA interaction frequency from Hi-C data
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Setting element outside matrix
#16
ebioman
opened
2 years ago
1
Some issues with samtools when running the example datatset
#15
princeps091-binf
opened
3 years ago
1
Contact matrix element divided by zero
#14
yasumasak
opened
3 years ago
2
find a threshold for significant contacts
#13
gorliver
opened
3 years ago
0
Invalid input types
#12
mhughe10
opened
3 years ago
1
plotting with fixed bin resolution?
#11
hwlim
opened
3 years ago
1
Recommended memory size
#10
hwlim
opened
3 years ago
1
Is HIFI limited to PE Illumina sequencing data?
#9
jychoilab
opened
3 years ago
3
src/parseHIFIoutput.py
#8
xiaobei1999
opened
3 years ago
2
callPeaks get killed
#7
brzeli
opened
4 years ago
0
Would u pls consider migrate it to python 3?
#6
yangyxt
closed
4 years ago
1
HIFI Kill Error
#5
14stutzmanav
closed
2 years ago
1
matplotlib error during plotHIFIoutput.py running
#4
wsuplantpathology
closed
2 years ago
7
samtools error in BAMtoSparseMatrix.py
#3
ekokrek
closed
4 years ago
1
Starting with sparse matrix as input to HIFI?
#2
jstansfield0
closed
5 years ago
1
Little question about the output of BAMtoSparseMatrix.py
#1
Linhua-Sun
closed
5 years ago
1