Blosberg nanopiper issues

Blosberg / nanopiper

(long read) fastq input to final report

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Store snippets

#29 Blosberg closed 4 years ago
0
Handle multifast5

#28 Blosberg closed 5 years ago
0
accomodate change to fast5 folder structure.

#27 Blosberg opened 5 years ago
0
Multiple source folders

#26 Blosberg closed 5 years ago
1
Named reads

#25 Blosberg closed 5 years ago
0
Cleanup snippets

#24 Blosberg closed 5 years ago
0
Grl read chunks

#23 Blosberg closed 5 years ago
0
consolidate pore-model data into single file.

#22 Blosberg opened 5 years ago
0
break-up GRL-read conversion chunks

#21 Blosberg opened 5 years ago
0
Testing wrapper

#20 Blosberg closed 5 years ago
0
Olap rule should distinguish between GR and GRL

#19 Blosberg opened 5 years ago
0
Testing wrapper

#18 Blosberg closed 5 years ago
0
allow command-line overrides of options

#17 Blosberg closed 5 years ago
0
make fastq link rule depend on base-calling

#16 Blosberg opened 5 years ago
0
Parallelize samples

#15 Blosberg closed 5 years ago
0
Need to incorporate multiple reference loci

#14 Blosberg closed 5 years ago
1
Expand wrapper script

#13 Blosberg opened 5 years ago
0
control strand type (RNA /DNA ) from config file

#12 Blosberg opened 5 years ago
0
incorporate samplename into xname for histograms

#11 Blosberg opened 5 years ago
0
Generalize config file

#10 Blosberg closed 5 years ago
2
Need to generalize alignment

#9 Blosberg closed 5 years ago
1
Add multiple unknown options for plotting

#8 Blosberg closed 5 years ago
1
Eliminate bwa

#7 Blosberg closed 6 years ago
0
mute print statements when using --dag to avoid "Error: <stdin>: syntax error in line 1 near 'Write'"

#6 Blosberg opened 6 years ago
0
parellelizes the submission to handle multiple input formats.

#5 Blosberg closed 6 years ago
0
Current alignment

#4 Blosberg closed 6 years ago
0
Need to standardize "Novel transcripts" section

#3 Blosberg opened 6 years ago
0
GLIBC not found on cluster

#2 Blosberg opened 6 years ago
1
untraceable alignments

#1 Blosberg closed 6 years ago
1