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CAREamics
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careamics
A deep-learning library for N2V and friends
https://careamics.github.io/
BSD 3-Clause "New" or "Revised" License
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Add stop training method
#249
jdeschamps
opened
5 days ago
2
Feature: Update BMZ export
#248
melisande-c
closed
2 weeks ago
0
In `Transform` objects, should `target` be folded into new `additional_arrays` kwargs?
#247
melisande-c
opened
2 weeks ago
0
bug fix (LC + noise set)
#246
ashesh-0
closed
2 weeks ago
0
Chore: Split test CIs into CAREamics official and LVAE
#245
jdeschamps
closed
3 weeks ago
1
Improve testing speed
#244
jdeschamps
opened
3 weeks ago
2
tooling: Add parallel testing
#243
jdeschamps
closed
3 weeks ago
2
fix: fixing various bugs to enable microSplit training
#242
federico-carrara
closed
3 weeks ago
0
fix: set upper Pydantic version to 2.8
#241
jdeschamps
closed
3 weeks ago
1
3D model
#240
CatEek
opened
3 weeks ago
2
Add custom transforms to convenience functions, and other API improvement
#239
jdeschamps
closed
1 week ago
2
Feature: Transform multiple arrays identically to `patch` and `target`
#238
melisande-c
closed
3 weeks ago
3
ci(pre-commit.ci): autoupdate
#237
pre-commit-ci[bot]
closed
3 weeks ago
0
fix: making range parameter mandatory in `psnr()`
#236
federico-carrara
closed
3 weeks ago
0
[test-bot] pip install --pre is failing
#235
github-actions[bot]
closed
3 weeks ago
0
[test-bot] pip install --pre is failing
#234
github-actions[bot]
closed
3 weeks ago
0
refac: removed noise model parameters from `LadderVAE` module
#233
federico-carrara
closed
4 weeks ago
0
refac: refactored serialization of arrays for noise model and likelihood configs
#232
federico-carrara
closed
3 weeks ago
2
Specify transformations in config convenience functions
#231
jdeschamps
closed
1 week ago
0
feat: added more metrics for evaluation of Splitting results
#230
federico-carrara
closed
3 weeks ago
1
Remove old examples
#228
CatEek
closed
1 month ago
1
feat: added ADAMAX optimizer among supported ones
#227
federico-carrara
closed
1 month ago
0
feat: enabling `Adamax` optimizer for LVAE-based split models
#226
federico-carrara
closed
1 month ago
0
Added several params to training model
#225
CatEek
closed
3 weeks ago
5
Bug fix NoiseModel and LVAE training
#224
CatEek
opened
1 month ago
4
LVAE dataset: add MultiFileDset
#223
veegalinova
closed
1 week ago
1
Simplify `AlgorithmConfig` discrimination
#222
jdeschamps
closed
3 weeks ago
0
Add custom algorithm to `FCNAlgorithmConfig`
#221
jdeschamps
closed
1 month ago
2
Update authors list
#220
jdeschamps
closed
1 month ago
0
Feature: LVAE predict on whole dataset
#219
melisande-c
opened
1 month ago
0
Implemented `training_step` and `validation_step`, fixed all the configs needed to instantiate the lightning module
#218
federico-carrara
closed
1 month ago
1
Feature: Function that computes CAREamics `TileInformation` with `GridIndexManager`
#217
melisande-c
closed
3 weeks ago
0
Making functions in `utils/metrics.py` compatible with `torch.Tensor` inputs
#216
federico-carrara
opened
1 month ago
0
Masked percentage value upper limit
#215
CatEek
closed
1 month ago
0
docs: fix typos, and fix building of docs
#214
tlambert03
closed
1 month ago
2
Fixing circular import error arising from importing `UNet` in `models/__init__.py`
#213
federico-carrara
closed
1 month ago
0
LVAE dataset: replace ml_config with pydantic
#212
veegalinova
closed
1 month ago
0
Feature: LVAE prediction compatible with CAREamics tiling pipeline
#211
melisande-c
closed
1 month ago
0
Noise model training
#210
CatEek
closed
1 month ago
2
Renaming pydantic models for noise models and likelihood to `SomethingConfig`
#209
federico-carrara
closed
1 month ago
0
General refactoring and testing of LVAE loss functions.
#208
federico-carrara
closed
1 month ago
0
Feature: Add tiling method from Disentangle repository
#207
melisande-c
closed
1 month ago
3
Feature: LVAE prediction functions
#206
melisande-c
closed
1 month ago
1
Refactor: Noise Models
#205
federico-carrara
closed
1 month ago
0
[BUG] Error loading pretrained model. Could not determine a constructor for the tag.
#204
nunopimpaomartins
closed
1 month ago
4
Chore: Update README
#203
jdeschamps
closed
1 month ago
0
GitHub Action Codecov v0.8.0 failing for Mac OS [BUG]
#201
melisande-c
opened
1 month ago
1
Fix: Use Codecov CLI version v0.7.3 in github action
#200
melisande-c
closed
1 month ago
0
Revert: Set bioimageio.core>=0.6.0 as before
#199
melisande-c
closed
1 month ago
0
ci(pre-commit.ci): autoupdate
#198
pre-commit-ci[bot]
closed
1 month ago
1
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