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CDCgov
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PyRenew
Python package for multi-signal Bayesian renewal modeling with JAX and NumPyro.
https://cdcgov.github.io/PyRenew/
Apache License 2.0
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Tutorial / Model Demonstrating limitations of `scan` with `numpyro.plate`
#444
damonbayer
opened
1 hour ago
0
Document the convention that the first axis is time whenever a multi-dimensional array is a timeseries
#443
dylanhmorris
opened
5 hours ago
3
Vectorize `DifferencedProcess`
#442
dylanhmorris
opened
5 hours ago
0
Remove `SampledValue`
#441
damonbayer
closed
1 day ago
1
update infectionswithfeedback process
#440
sbidari
opened
2 days ago
3
Vectorize `ARProcess()`
#439
dylanhmorris
closed
1 hour ago
5
Remove duplicate test introduced in #437
#438
damonbayer
closed
2 days ago
1
Add default observation rate to `compute_delay_ascertained_incidence`
#437
damonbayer
closed
2 days ago
1
Fix text in readme
#436
damonbayer
closed
3 days ago
1
Update InfectionsWithFeedback process to handle batch input within numpyro plate context
#435
sbidari
opened
6 days ago
0
Parallelize quarto rendering of tutorials in CI
#434
dylanhmorris
opened
6 days ago
1
Clean Up `InfectionInitializationMethod` and `InfectionInitializationProcess`
#433
damonbayer
opened
1 week ago
1
Reworks `InitializeInfectionsExponentialGrowth` to work with `numpyro.plate`
#432
damonbayer
closed
6 days ago
5
Further Prune PostProcessing Code, Specifically plot_posterior And spread_draws
#431
AFg6K7h4fhy2
opened
1 week ago
0
Modify README With Instantiated Model Information
#430
AFg6K7h4fhy2
closed
1 week ago
1
Edit README To Include Instantiated Models
#429
AFg6K7h4fhy2
closed
1 week ago
1
create a censored normal distribution
#428
sbidari
closed
6 days ago
5
Create a CensoredNormal distribution
#427
sbidari
closed
6 days ago
1
Further Prune PostProcessing Code, Specifically `plot_posterior` And `spread_draws`
#426
AFg6K7h4fhy2
opened
1 week ago
0
Remove `spread_draws` and `plot_posterior` from `metaclass`
#425
damonbayer
closed
1 week ago
1
Remove redundant `jnp.array` in ar.py
#424
damonbayer
closed
1 week ago
1
Update ARProcess and InfectionInitializationProcess to handle batched input
#423
sbidari
opened
1 week ago
19
Remove UTF-8 Encoding Headers
#422
AFg6K7h4fhy2
closed
2 weeks ago
1
Use dev version of numpyro
#421
damonbayer
closed
2 weeks ago
1
Consistent Behavior With UTF-8 Encoding
#420
AFg6K7h4fhy2
closed
2 weeks ago
1
Cleanup `rtperiodicdiffar`
#419
damonbayer
opened
2 weeks ago
1
Remove singleton tuples
#418
damonbayer
closed
1 day ago
1
Set `find_heuristic_step_size` Default To `True`
#417
AFg6K7h4fhy2
closed
2 weeks ago
1
Fix README numpyro link formatting in RST version
#416
damonbayer
closed
2 weeks ago
1
Set `find_heuristic_step_size` to `True` by default.
#415
damonbayer
closed
2 weeks ago
0
Deterministic module documentation missing from the webpage
#414
sbidari
opened
2 weeks ago
0
Make target for building docs with sphinx
#413
damonbayer
opened
2 weeks ago
1
create `randomvariable` module
#412
sbidari
closed
2 weeks ago
7
Clean up actions
#411
damonbayer
closed
2 weeks ago
1
Standardize variable names for conditional probabilities and delay distributions
#410
sbidari
opened
3 weeks ago
0
Elevate contents of src to root directory
#409
damonbayer
closed
3 weeks ago
1
Elevate contents of `src` to root directory
#408
damonbayer
closed
3 weeks ago
0
Deprecate `record` for `DeterministicVariable`s
#407
damonbayer
opened
3 weeks ago
1
Using TransformedRandomVariable
#406
gvegayon
closed
3 weeks ago
1
DRY-ify AR process tests
#405
dylanhmorris
opened
3 weeks ago
0
Consider making AR process work with multi-dimensional arrays
#404
dylanhmorris
opened
3 weeks ago
0
Standard check function for "integer greater than value"
#403
dylanhmorris
opened
3 weeks ago
0
Replacing MyDOWEffect with TransformedRandomVariable in day of the week tutorial
#402
gvegayon
closed
3 weeks ago
5
Future of PyRenew container?
#401
damonbayer
closed
2 weeks ago
2
make `deptry` checks in CI more fine-grained
#400
dylanhmorris
closed
3 weeks ago
1
Rename instances of Multisignal Renewal to PyRenew
#399
damonbayer
closed
3 weeks ago
3
Test convolve mode in hospitaladmissionspy
#398
sbidari
closed
2 weeks ago
3
remove pipeline folder
#397
damonbayer
closed
3 weeks ago
1
Automatically wrap long docstrings
#396
damonbayer
opened
3 weeks ago
0
Ensure float in scaled logit constraint
#395
dylanhmorris
closed
3 weeks ago
1
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