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CanDIG
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clinical_ETL_code
A library to convert clinical data in csv format into json documents for CanDIG ingestion
GNU Lesser General Public License v3.0
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a Failure messages from running CSVConverter
#81
rjiang9
opened
8 hours ago
0
Update validation and test data for model 3.1
#80
mshadbolt
opened
1 day ago
1
Questions About the in manifest
#79
rjiang9
opened
6 days ago
0
Add RedCap export splitting script
#78
mshadbolt
closed
1 week ago
0
A question about the date format (REDCap data)
#77
rjiang9
closed
1 week ago
2
Where is the place to authorize the cohort
#76
rjiang9
closed
1 week ago
2
A question about
#75
rjiang9
closed
1 week ago
16
Stable candidate v3.0.0
#74
mshadbolt
closed
4 weeks ago
0
Stable candidate v3.0.0
#73
mshadbolt
closed
1 month ago
0
Stable candidate v3.0.0
#72
mshadbolt
closed
1 month ago
0
Stable candidate v3.0.0
#71
mshadbolt
closed
1 month ago
0
Update to version 3
#70
mshadbolt
closed
1 month ago
0
Fix up some of the validations
#69
mshadbolt
closed
1 month ago
0
DIG-1684: Update clinical_etl to v3 clinical data model
#68
yavyx
closed
1 month ago
1
add sample redcap files
#67
kcranston
closed
2 months ago
1
DIG-1671: Adding date format to manifest
#66
yavyx
closed
3 months ago
3
v2.2.1: Documentation, validation improvements
#65
daisieh
closed
4 months ago
0
Improved documentation, validation and completeness summarization
#64
yavyx
closed
4 months ago
0
Merge changes from stable to develop
#63
mshadbolt
closed
5 months ago
0
Stable candidate v2.2.0
#62
mshadbolt
closed
5 months ago
1
Improve output, save validation results to file, add more date validations
#61
mshadbolt
closed
5 months ago
0
Merge release v2.1.0 into stable branch
#60
yavyx
closed
6 months ago
0
Add support for File URLs to OpenAPI schemas
#59
OrdiNeu
opened
6 months ago
1
fix int method, more details in warning
#58
mshadbolt
closed
6 months ago
0
add main and have CSVConvert as CLI script
#57
mshadbolt
closed
6 months ago
0
Update docs for the recent addition of args
#56
mshadbolt
closed
6 months ago
0
Add index and minify command line arguments
#55
mshadbolt
closed
6 months ago
0
change float() to floating() in mapping functions
#54
lilyyangyi301
closed
6 months ago
0
DIG-1150: Template update and documentation for DateIntervals
#53
mshadbolt
closed
6 months ago
0
Site-specific ETL code.
#52
DavidBrownlee
closed
7 months ago
0
DIG-1473: Accept date intervals (rather than absolute dates).
#51
DavidBrownlee
closed
6 months ago
3
Module path changes to allow running standalone (not as an included m…
#50
DavidBrownlee
closed
6 months ago
0
DIG-1245: dates as date intervals
#49
daisieh
closed
7 months ago
2
Generalize schema class used for conversion/validation
#48
daisieh
closed
7 months ago
0
DIG-1144: Update to Python 3.12
#47
daisieh
closed
9 months ago
3
DIG-1219: clinical_ETL_code as a package
#46
daisieh
closed
9 months ago
2
Small fixes
#45
daisieh
closed
9 months ago
0
Update for katsu uuids
#44
daisieh
closed
9 months ago
0
Split out jsonschema conversion
#43
daisieh
closed
9 months ago
0
DIG-1359: Documentation, error handling and code improvements for usability
#42
mshadbolt
closed
10 months ago
0
Pass on statistics
#41
daisieh
closed
10 months ago
0
DIG-1361: comment out radiation/surgery counts
#40
daisieh
closed
10 months ago
0
Add REPO_DIR to paths
#39
daisieh
closed
10 months ago
0
fix mapping functions for surgeries in mapping template
#38
mshadbolt
closed
10 months ago
3
DIG-1346: distinguish between errors and warnings
#37
daisieh
closed
10 months ago
2
DIG-1344: make sure no dup IDs in schemas
#36
daisieh
closed
10 months ago
2
DIG-1325: Don't add required_but_missing fields to failure list
#35
daisieh
closed
11 months ago
0
added single_map helper function
#34
yavyx
closed
12 months ago
0
Hotfix for treatment_type missing
#33
daisieh
closed
12 months ago
5
DIG-1285 redux: forgot latest bits in moh_template
#32
daisieh
closed
1 year ago
0
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