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CellProfiler
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python-bioformats
Read and write life sciences file formats
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Getting Exact Time Values for Timeseries Image Stack
#120
sbowerma
opened
5 years ago
0
Error opening Tif file with bioformats?
#119
cudmore
opened
5 years ago
0
Set option to read attachments for CZI images using python-bioformats
#118
sebi06
opened
5 years ago
0
error messsage when writing OME-TIFF
#117
sebi06
opened
5 years ago
1
write numpy array as OME-TIFF question
#116
sebi06
opened
5 years ago
0
Make `set_image_count()` efficient with large values.
#115
riccardomurri
opened
5 years ago
0
get_omexml_metadata() is returning "null" or "other" for all values
#114
StuckinPhD
opened
5 years ago
0
Import 2D+t time series
#113
dschetel
opened
5 years ago
2
Resolve five undefined names found by flake8
#112
cclauss
closed
6 years ago
0
Undefined names may raise NameError at runtime
#111
cclauss
closed
6 years ago
0
OMEXML Disparity between output from `loci_tools.jar` and `showinf`?
#110
jnj16180340
opened
6 years ago
0
Update bioformats JAR to v5.9.0
#109
jnj16180340
closed
6 years ago
0
write_image add PhysicalSize
#108
tribol
opened
6 years ago
0
concatenate time series
#107
hummuscience
opened
6 years ago
0
What's the proper way to write 5D data?
#106
morganrcu
opened
6 years ago
7
Fix documentation on testing
#105
ehrenfeu
opened
6 years ago
0
Derive version info from git tags
#104
ehrenfeu
closed
6 years ago
1
Add methods to access units for physical pixel sizes
#103
ehrenfeu
closed
6 years ago
0
Add method to access physical size for Z axis
#102
ehrenfeu
closed
6 years ago
0
Support units of measurement
#101
ehrenfeu
opened
6 years ago
0
Fix example in OMEXML.Pixels docstring
#100
ehrenfeu
closed
6 years ago
0
Example from OMEXML.Pixels docstring is slightly broken
#99
ehrenfeu
opened
6 years ago
0
Download images from s3
#98
mcquin
closed
6 years ago
0
Update to class ImageReader docstring
#97
GenevieveBuckley
closed
6 years ago
0
get_PhysicalSizeZ() function missing in Pixels
#96
vladchimescu
closed
6 years ago
0
Heap space error
#95
yoda-vid
opened
6 years ago
0
Documentation bug in ImageReader
#94
omsai
opened
6 years ago
3
Reading .jp2 files
#93
jacobpennels
opened
6 years ago
2
PyPI Issue: Only able to import methods from bioformats when installing from github using setup-tools
#92
mjlbach
closed
6 years ago
3
Release 1.3.2
#91
mcquin
closed
6 years ago
0
Fix demo script.
#90
mcquin
closed
7 years ago
0
Demo file does not work
#89
everyones
closed
7 years ago
0
Upgrade to BioFormats 5.7.1
#88
mcquin
closed
7 years ago
0
Updated BioFormats to 5.7.0
#87
0x00b1
closed
7 years ago
0
`bioformats.__version__` should print package version
#86
mcquin
closed
6 years ago
1
update test url
#85
mcquin
closed
7 years ago
0
Test failure in test_load_using_bioformats
#84
mcquin
closed
7 years ago
1
Upgrade bioformats to 5.5.3
#83
mcquin
closed
7 years ago
2
Bio-formats 5.5
#82
nerduno
closed
7 years ago
3
Remove default values on image elements
#81
hackermd
opened
7 years ago
0
Reading Tiles
#80
darosio
opened
7 years ago
1
Encode both 'str' and 'unicode'
#79
BioGeek
closed
7 years ago
2
Incorrect namespaces detection leads to incomplete/ incorrect metadata readout
#78
FannyGeorgi
opened
7 years ago
2
ImportError javabridge although Cellprofiler installed fine
#77
anou85
closed
7 years ago
5
Possible strategies to include new features of BioFormats 5.3.1
#76
sebi06
opened
7 years ago
4
Release 1.1.0
#75
mcquin
closed
7 years ago
0
Pure Python implementation of OmeroReader
#74
emilroz
closed
7 years ago
0
add physical pixel size
#73
helme
opened
7 years ago
1
Upgrade the bioformats jar to 5.2.4.
#72
gatagat
closed
7 years ago
3
deploy packages on python 2.7
#71
mcquin
closed
8 years ago
0
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