Clinical-Genomics cgstats issues

Clinical-Genomics / cgstats

Models and connecting to clinstatsdb

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Add - Github Actions - Remove Travis-CI and pylint

#35 karlnyr closed 1 year ago
0
Remove Travis-CI

#34 barrystokman closed 1 year ago
3
Adding csv as a possible datasource

#33 karlnyr closed 2 years ago
1
Doesn't work to remove flowcell with command cgstats delete

#32 moahaegglund closed 2 years ago
2
Fix add rapid flowcells

#31 karlnyr closed 2 years ago
9
Fix/add rapid flowcells

#30 karlnyr closed 3 years ago
0
no more usage of basemask in novaseqparse.py

#29 karlnyr closed 3 years ago
3
2500 demux on hasta

#28 barrystokman closed 3 years ago
0
Fix projectlog parsing

#27 barrystokman closed 3 years ago
2
SAWarning: Cascade settings "delete, merge, save-update" should not be combined with a viewonly=True relationship.

#26 barrystokman closed 1 year ago
0
Add jobs to CI build

#25 patrikgrenfeldt closed 3 years ago
1
Iseq parse fix

#24 barrystokman closed 4 years ago
4
The database select test should have a specific mysql version

#23 patrikgrenfeldt closed 1 year ago
0
All tests should be runnable locally

#22 patrikgrenfeldt closed 1 year ago
0
Support iseq

#21 patrikgrenfeldt closed 4 years ago
8
3.5 demultiplexing added to cgstats

#20 emiliaol closed 4 years ago
2
lock Flask-SQLAlchemy version

#19 patrikgrenfeldt closed 5 years ago
0
Move dev requirements to requirements-dev.txt

#18 patrikgrenfeldt closed 1 year ago
0
add git-lint on travis build

#17 patrikgrenfeldt closed 5 years ago
0
Prevent cgstats from updating Flask-SQLAlchemy when updating PROD

#16 barrystokman closed 5 years ago
4
Update requirements.txt

#15 ingkebil closed 5 years ago
1
Parse novaseq dualindex

#14 barrystokman closed 5 years ago
0
Parse stats from NovaSeq for cgstats, dualindex

#13 barrystokman closed 5 years ago
0
Parse novaseq stats

#12 barrystokman closed 5 years ago
0
reads stats should be parsed from cgstats db by LIMS in the CG002 - Sequence Aggregation step

#11 emiliaol closed 1 year ago
0
Added table descriptions

#10 patrikgrenfeldt closed 6 years ago
1
parse stats from novaseq for cgstats

#9 barrystokman closed 5 years ago
1
remove web ui

#8 robinandeer closed 4 years ago
1
Feat cli

#7 robinandeer closed 7 years ago
0
new features

#6 robinandeer closed 4 years ago
1
`lfowcells --sample` fails on old CG ids that have B or F appended

#5 ingkebil closed 1 year ago
0
add sequencing date to flowcell/analysis sample

#4 robinandeer closed 4 years ago
3
Import CRUD scripts

#3 ingkebil closed 7 years ago
1
CLI to ask if a sample has enough reads

#2 robinandeer closed 7 years ago
2
Separate config

#1 robinandeer closed 8 years ago
16