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Data2Dynamics
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d2d
a modeling environment tailored to parameter estimation in dynamical systems
https://github.com/Data2Dynamics/d2d
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Correction of pre-equilibration in Fiedler_BMC2016
#128
JanHasenauer
closed
6 years ago
0
distributionPlot: Plot not smooth enough
#127
brianpenghe
closed
6 years ago
4
it takes a long time to load model
#126
rosewu
closed
4 years ago
6
Remove Statistics tbx dependency from some files
#125
Armavica
closed
6 years ago
1
Fix two wiki links
#124
Armavica
closed
6 years ago
2
New: Chen2009 and Fujita2010 models added
#123
elbaraim
closed
6 years ago
0
added reactions instead of ODEs
#122
LoosC
closed
6 years ago
0
New example model added
#121
LoosC
closed
6 years ago
0
drop in successful optimisation from 100% to < 20% between D2D versions
#120
JanHasenauer
closed
6 years ago
7
Addition of Brannmark_JCB2010 and Weber_BMC2015 examples
#119
JanHasenauer
closed
6 years ago
0
Additional application Brannmark et al. 2010
#118
JanHasenauer
closed
6 years ago
0
error in arExportSBML
#117
rosewu
closed
6 years ago
3
New example added
#116
LoosC
closed
6 years ago
0
Issue with specific equations in input functions
#115
hhass
closed
6 years ago
1
arStruct, additional information about the variable ar
#114
plakrisenko
closed
6 years ago
2
Merge pull request #1 from Data2Dynamics/master
#113
JanineEgert
closed
6 years ago
0
Two additional examples
#112
JanHasenauer
closed
6 years ago
0
MATLAB R2018a compatibility issue
#111
araue
closed
6 years ago
7
Compling error in Matlab R2017 a
#110
AlokMaity
closed
6 years ago
0
SBML import not working for models with constant=False compartments
#109
matthiaskoenig
closed
4 years ago
3
approach for variant parameters
#108
mikeaalv
closed
6 years ago
4
differences between fixed and constant
#107
mikeaalv
closed
6 years ago
2
about the unit type and integer
#106
mikeaalv
closed
6 years ago
5
measurement distribution
#105
mikeaalv
closed
6 years ago
2
arImportSBML, import of reversible reactions
#104
plakrisenko
closed
6 years ago
2
How to include conservation relation constraints?
#103
SchSascha
closed
6 years ago
5
Questions about arImportSBML.
#102
plakrisenko
closed
4 years ago
1
Error message in argSwitch
#101
plakrisenko
closed
7 years ago
3
How to call the arImportSBML function?
#100
plakrisenko
closed
7 years ago
1
Delay differential equations
#99
dvimal27
closed
7 years ago
1
Issue on newer versions of MSVC
#98
JoepVanlier
closed
7 years ago
1
Initialisation of sensitivities for parameters not influencing the steady state
#97
JanHasenauer
closed
7 years ago
3
Best way to use known data as input
#96
t-schmitt
closed
7 years ago
12
running doTests on Windows
#95
plakrisenko
closed
7 years ago
3
Faulty house keeping in cache functionality
#94
araue
closed
7 years ago
7
L1 Plot draws empty plots
#93
ryvinec
closed
7 years ago
2
L1 penalization when all parameters are cell-specific
#92
ryvinec
closed
7 years ago
1
showcases
#91
evgeni-nikolaev
closed
7 years ago
1
an explicit tutorial
#90
evgeni-nikolaev
closed
7 years ago
4
Extended Functionalities and Function Reference
#89
evgeni-nikolaev
closed
7 years ago
1
Major bug: Fixed errors handled incorrectly
#88
JoepVanlier
closed
7 years ago
1
SBML ODE model
#87
chiaraunipg
closed
6 years ago
1
How to use multiple datasets: one dataset per the corresponding initial condition?
#86
evgeni-nikolaev
closed
7 years ago
2
Likelihood in plot not updated during fitting (ar.config.showFitting=1)
#85
mschilling10
closed
7 years ago
2
Problem with arCompile
#84
Coolak64
closed
7 years ago
1
excessive trailing space in arCompile.m
#83
FFroehlich
closed
7 years ago
1
Various smaller bugs due to new structure. Please fix and do more testing before pushing into master!
#82
leshaker
closed
7 years ago
2
Using arLink to change tLims doesn't work
#81
leshaker
closed
7 years ago
1
Calculation of residuals outside of arSimuCalc.c
#80
clemenskreutz
closed
7 years ago
1
ABC_model.def issues
#79
DhruvaDhruva
closed
7 years ago
6
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