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ELIFE-ASU
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Neet
Simulating and analyzing dynamical network models
https://neet.readthedocs.io/en/stable
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Control kernel code interfacing with newest landscape code
#201
bcdaniels
closed
1 year ago
2
Control kernels and modularity
#200
bcdaniels
opened
3 years ago
2
Random net tests
#199
akiaei
closed
3 years ago
1
Configure Github Actions for CI
#198
dglmoore
opened
4 years ago
0
Remove python27 workarounds
#197
dglmoore
opened
4 years ago
0
WIP: Boolean Network Randomization
#196
dglmoore
opened
4 years ago
8
Resolve #194
#195
dglmoore
closed
4 years ago
1
Network.network_graph discards disconnected nodes
#194
dglmoore
closed
4 years ago
0
WTNetwork.network_graph includes fake self-edges
#193
dglmoore
opened
4 years ago
4
Extended time sensitivity
#192
akiaei
opened
4 years ago
1
Myles PR
#191
Myles-Damon
closed
4 years ago
1
Replace tables in the docs
#190
hbsmith
closed
4 years ago
0
Add a Change Log
#189
dglmoore
closed
4 years ago
0
Derrida Plot
#188
dglmoore
opened
4 years ago
0
Derrida Value
#187
dglmoore
opened
4 years ago
0
Higher-Order Sensitivity
#186
dglmoore
closed
4 years ago
1
Demonstrative change
#185
dglmoore
closed
5 years ago
1
Add addendum about pygraphviz and graphviz as optional dependencies on the getting started page
#184
hbsmith
closed
5 years ago
1
Redirect to new documentation
#183
dglmoore
closed
5 years ago
0
Create a Pull Request Template
#182
dglmoore
closed
4 years ago
1
Add documentation badges to README
#181
dglmoore
closed
5 years ago
0
Create the Network.clone method
#180
dglmoore
opened
5 years ago
0
Add an example of what Neet does to the readme
#179
hbsmith
closed
4 years ago
0
Install graphviz on AppVeyor
#178
dglmoore
closed
5 years ago
1
Rename synchronous module to landscape
#177
dglmoore
closed
5 years ago
1
Examples v1.0.0
#176
hbsmith
closed
5 years ago
1
Move documentation to ReadTheDocs
#175
dglmoore
closed
5 years ago
1
Add Contributing Guidelines
#174
dglmoore
closed
4 years ago
1
Add a Code of Conduct
#173
dglmoore
closed
5 years ago
0
Deprecate neet.boolean.randomnet.random_logic
#172
dglmoore
closed
5 years ago
1
Bump up code coverage
#171
dglmoore
closed
4 years ago
0
Add deprecation warnings to randomization functions
#170
dglmoore
closed
5 years ago
0
Change "fixed" to "fixed-structure"
#169
dglmoore
closed
5 years ago
1
Remove testing support for Python 3.4
#168
dglmoore
closed
5 years ago
1
Code of Conduct
#167
dglmoore
closed
5 years ago
4
Add support for SBML import/export
#166
dglmoore
opened
5 years ago
0
Extend the LandscapeMixin
#165
dglmoore
closed
5 years ago
2
Remove extraneous imports and whitespace
#164
dglmoore
closed
5 years ago
1
Landscape data
#163
hbsmith
closed
5 years ago
4
basic landscape visualization
#162
hbsmith
closed
5 years ago
1
Make networks state spaces
#161
dglmoore
closed
5 years ago
1
Make Network.state_space a property
#160
dglmoore
closed
5 years ago
1
Implement direct integer update
#159
dglmoore
closed
5 years ago
1
Do not copy states in average_difference_matrix
#158
dglmoore
closed
5 years ago
1
Use index argument for _unsafe_update
#157
dglmoore
closed
5 years ago
1
Move BooleanSpace to neet.boolean.statespace
#156
dglmoore
closed
5 years ago
1
Sensitivity methods
#155
dglmoore
closed
5 years ago
1
Optimize LogicNetwork._unsafe_update
#154
dglmoore
opened
5 years ago
0
Start moving sensitivity functions to BooleanNetwork methods
#153
dglmoore
closed
5 years ago
0
Fix rounding error in StateSpace._unsafe_encode
#152
dglmoore
closed
5 years ago
1
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