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EddyRivasLab
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hmmer
HMMER: biological sequence analysis using profile HMMs
http://hmmer.org
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Package missing in current linux-64 channels (conda installation)
#183
ciemanek
closed
4 years ago
1
problem compiling
#182
lfaino
closed
4 years ago
1
HMMSCAN error in batch submission
#181
Geize
closed
4 years ago
3
RF annotation can impact model parameterization even without --hand
#180
nawrockie
closed
4 years ago
4
restoring points for hmmer analyses
#179
cmuenchow
closed
4 years ago
1
hmmer 3.3 does not detect correct march
#178
ifelsefi
closed
4 years ago
9
Make it possible to output A2M from Jackhmmer
#177
Augustin-Zidek
closed
4 years ago
3
p7_gmx_utest segfaults for large L and M
#176
cryptogenomicon
closed
4 years ago
0
Adds uint64_t casts to code that sets row pointers in p7_gmx_Create()…
#175
nawrockie
closed
4 years ago
2
esl_sqio_ReadBlock() uses new argument max_init_window
#174
nawrockie
closed
4 years ago
0
The result contains K_number under adaptive score threshold when use --domT
#173
xuechunxu
closed
4 years ago
2
Significant reduction in number of hits found when a database is processed with makehmmerdb
#172
npcarter
closed
3 years ago
1
--qfasta affects the number of hits NHMMER finds
#171
npcarter
closed
4 years ago
1
phmmer 'parse failed' error
#170
janstrauss1
closed
5 years ago
2
esl-sfetch corrupt coords
#169
ViriatoII
closed
5 years ago
6
makehmmerdb fails with extremely large number of input sequences
#168
manu-script
closed
4 years ago
9
fail to install hmmers
#167
limin321
closed
5 years ago
1
Const getopts
#166
horta
closed
5 years ago
0
Use the current repo for cloning easel
#165
horta
closed
5 years ago
3
char * to const char *
#164
horta
closed
5 years ago
0
Prevent argv[0] being free'd if esl_FileTail fails
#163
horta
closed
5 years ago
0
Fix a typo in variable name.
#162
Augustin-Zidek
closed
5 years ago
2
multithreads running problem
#161
JaneDY
closed
5 years ago
8
Travis pipeline for testing on x86_64 linux, powerpc, and darwin.
#160
horta
closed
5 years ago
2
nhmmer reports overlapping envelopes on reverse strand
#159
cryptogenomicon
closed
5 years ago
1
clang: error: no such file or directory: '@SSE4_CFLAGS@'
#158
horta
closed
5 years ago
1
hmmsim --mpi segfaults
#157
mathog
closed
5 years ago
5
Report an error-Alignment input parse error:
#156
geng-lee
closed
5 years ago
1
Mac OS 10.14.4 -configure: error: C compiler cannot create executables
#155
geng-lee
closed
5 years ago
2
Incorrect envfrom/envto values when hmmscan is run over MPI
#154
npcarter
closed
5 years ago
1
A new case causing error: "backconverted subseq didn't end at expected length"
#153
bioinformatist
closed
5 years ago
1
E-value
#152
amri2k
closed
5 years ago
3
Reading target sequences from stdin - hmmsearch
#151
iferres
closed
5 years ago
2
The following error occurred during installation
#150
lzyAzeii
closed
5 years ago
2
Translated search -> develop for H3 (redux)
#149
traviswheeler
closed
1 year ago
25
Compilation of v3.2.1 fails due to lib easel not linked
#148
fbreitwieser
closed
5 years ago
1
Alignment input parse error
#147
csijcs
closed
6 years ago
5
Translated search tools, with documentation
#146
traviswheeler
closed
6 years ago
1
Need to run autoconf when cloning from github.
#145
blaiseli
closed
6 years ago
1
Provide argument for version information
#144
hsiaoyi0504
closed
6 years ago
6
3.2.1 binaries are not available
#143
hsiaoyi0504
closed
6 years ago
8
Compilation fails on ppc64le
#142
cryptogenomicon
closed
4 years ago
4
Build fails on i586
#141
lgbaldoni
closed
6 years ago
5
jackhmmer --fast segfaults
#140
abretaud
closed
6 years ago
3
Proposed fix for possible qsort callback random return value
#139
nawrockie
closed
6 years ago
1
Profile-to-profile search ?
#138
mashu
closed
6 years ago
1
a change at position 5 of my query sequence causes position 1 to be designated a deletion, but only in v3, not v2
#137
hervold
closed
6 years ago
1
Add explicit branch for 2.4i; pull 2.5j
#136
anadon
closed
6 years ago
4
new case of p7_alidisplay "backconverted subseq didn't end at expected length"
#135
cryptogenomicon
closed
6 years ago
3
jackhmmer -E 10 returns far less alignment than -E 1e-3 for some query.
#134
kad-ecoli
closed
6 years ago
1
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