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EthoML
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VAME
Variational Animal Motion Embedding - A tool for time series embedding and clustering
https://ethoml.github.io/VAME/
GNU General Public License v3.0
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Dev
#66
vinicvaz
opened
5 days ago
1
Update parametrization dependent functions to accept parametrization as argument
#65
vinicvaz
opened
5 days ago
0
Change community analysis cohort level saved files path
#64
vinicvaz
opened
5 days ago
0
Include search functionality in the documentation page
#63
katiekly
opened
1 week ago
0
Dev
#62
vinicvaz
closed
1 week ago
1
Mege main
#61
vinicvaz
closed
1 week ago
0
Move utils functions to utils model
#60
vinicvaz
closed
1 week ago
0
Remove unused functions
#59
vinicvaz
closed
1 week ago
0
Feat/run all parametrization
#58
vinicvaz
closed
5 days ago
0
refactor(vame): duplicate functions
#57
vinicvaz
closed
1 week ago
0
Dev
#56
vinicvaz
closed
1 week ago
1
Build DANDI Compatibility
#55
katiekly
opened
2 weeks ago
0
Build NWB compatibility
#54
katiekly
opened
2 weeks ago
0
Automatically run both clustering algorithms (HMM and kmeans) instead of using parameterization variable in the config
#53
katiekly
opened
2 weeks ago
0
Update docs
#52
vinicvaz
closed
3 weeks ago
0
Update docs
#51
vinicvaz
closed
3 weeks ago
0
Map and refactor functions to avoid code repetition
#50
vinicvaz
closed
1 week ago
0
Community analysis and umap should be separated
#49
vinicvaz
closed
1 week ago
0
Use append mode on logger
#48
vinicvaz
closed
3 weeks ago
0
Improve text location of motif/community videos
#47
katiekly
opened
3 weeks ago
1
Inform users estimated data output size at intermediate steps
#46
katiekly
opened
3 weeks ago
0
Add motif thresholding
#45
katiekly
opened
3 weeks ago
1
Add Community motif videos to package and GUI
#44
katiekly
closed
1 week ago
0
Use 3 keypoints for egocentric alignment to account for spine curvature
#43
katiekly
opened
3 weeks ago
0
Create VAME Project Class
#42
katiekly
opened
3 weeks ago
0
create_video function breaking with label = None
#41
vinicvaz
closed
3 weeks ago
2
optimize imports
#40
bendichter
closed
3 weeks ago
2
Build compatibility with SLEAP
#39
bendichter
opened
3 weeks ago
0
Community analysis breaking for cohort=False and show_umap=True
#38
vinicvaz
closed
3 weeks ago
0
Add logger
#37
vinicvaz
closed
3 weeks ago
0
replace redirect stream with logger class
#36
vinicvaz
closed
1 month ago
0
Problem with mp4 codecs for browsers
#35
vinicvaz
closed
3 weeks ago
0
Add pydantic models and project state
#34
vinicvaz
closed
3 weeks ago
0
Refactor - output files and logs
#33
vinicvaz
closed
4 weeks ago
0
Community analysis breaking for cohort=True and show_umap=True
#32
vinicvaz
opened
1 month ago
2
Save videos in web-friendly format
#31
garrettmflynn
closed
3 weeks ago
1
Save UMAP Visualization as PNG
#30
garrettmflynn
closed
3 weeks ago
0
Legacy tests
#29
vinicvaz
closed
1 month ago
0
add conditional cuda to generative models
#28
vinicvaz
closed
1 month ago
1
Increase test cov
#27
vinicvaz
closed
1 month ago
0
Refactor/move legacy
#26
vinicvaz
closed
4 weeks ago
1
Dev
#25
vinicvaz
closed
3 weeks ago
1
Increase code coverage
#24
vinicvaz
closed
1 month ago
0
Revert "dev"
#23
katiekly
closed
1 month ago
0
Relocate IQR cleaning into egocentric_alignment() and rename function
#22
katiekly
opened
1 month ago
0
Deprecated and not used variables/arguments
#21
vinicvaz
closed
1 week ago
2
Legacy code mapping
#20
vinicvaz
closed
3 weeks ago
1
Fix/analysis
#19
vinicvaz
closed
1 month ago
5
Workflows
#18
vinicvaz
closed
2 months ago
1
Workflows
#17
vinicvaz
closed
2 months ago
0
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