Evolinc Evolinc-I issues

Evolinc / Evolinc-I

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evolinc-i deletes fastq.gz files in directory where it is run - issue fixed!

#21 chosenobih closed 1 year ago
0
Error in parsing transcripts

#20 KristinaGagalova closed 3 years ago
5
Using merged from gffcompare on DE

#19 luciaq21 closed 4 years ago
1
Chromosome IDs of Evolinc identified lincRNAs do not match parent annotation.

#18 kylepalos opened 4 years ago
0
Questions about Evolinc modifications since publication

#17 luciaq21 opened 4 years ago
1
Running evolinc on a cluster

#16 luciaq21 closed 4 years ago
7
final_summary_table_gen_evo-I.R sub() function?

#15 sateeshperi closed 5 years ago
2
Error running Evolinc-I With both mandatory and optional files for sample data

#14 sateeshperi closed 5 years ago
1
Add an option for long read filtering/comparison.

#13 andrew-d-l-nelson closed 4 years ago
1
Offer the option for FPKM filter in Evolinc-I

#12 andrew-d-l-nelson closed 6 years ago
1
Patch for TE search

#11 andrew-d-l-nelson closed 6 years ago
0
Swap BLAST out for LAST

#10 andrew-d-l-nelson closed 6 years ago
0
Error in calling unlink in diamondBlast step

#9 andrew-d-l-nelson closed 5 years ago
1
IUPAC ambiguity codes in FASTA file

#8 AndreinaCastillo closed 5 years ago
2
Modify transcript filtering and add cpc2 step

#7 upendrak closed 7 years ago
0
Replace underscores in Known_lincRNA bed file

#6 andrew-d-l-nelson closed 5 years ago
1
Add rFAM automatic screen

#5 andrew-d-l-nelson closed 5 years ago
1
Modify "updated gff"

#4 andrew-d-l-nelson closed 7 years ago
1
Create "intronic space" parameter

#3 andrew-d-l-nelson closed 5 years ago
1
Add AOTs and SOTs to updated GFF file

#2 andrew-d-l-nelson opened 7 years ago
1
Cleaned up FASTA and GFF headers

#1 andrew-d-l-nelson closed 7 years ago
0