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FoxoTech
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methylprep
Python-based preprocessing software for Illumina methylation arrays
MIT License
34
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14
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v1.1.8: CLI and sample_sheet improvemnets
#31
marcmaxson
closed
5 years ago
0
Create sample sheet includes sample_type now from MINiML
#30
marcmaxson
closed
5 years ago
0
v1.1.5 geo downloader fixes and documentation fixes
#29
marcmaxson
closed
5 years ago
0
ver 1.1.4
#28
marcmaxson
closed
5 years ago
0
sample_sheet parser forces Sample_Name(s) exist and are unique; will cause name-mismatches in methylcheck.
#27
marcmaxson
closed
5 years ago
2
downloader - remove unused folders after processing
#26
marcmaxson
closed
5 years ago
0
download function confused by other non-supported GPL-platform types
#25
marcmaxson
closed
5 years ago
2
added rawMetaDataset class
#24
marcmaxson
closed
5 years ago
0
v1.1 release
#23
marcmaxson
closed
5 years ago
0
version 1.1
#22
marcmaxson
closed
5 years ago
0
Feature/public data
#21
marcmaxson
closed
5 years ago
0
Feature/batch size
#20
marcmaxson
closed
5 years ago
0
removed test; changed default behavior: won't raise error if file-to-…
#19
marcmaxson
closed
5 years ago
0
Fix
#18
marcmaxson
closed
5 years ago
0
bug Fix
#17
marcmaxson
closed
5 years ago
0
re-renaming
#16
marcmaxson
closed
5 years ago
0
confirm order of probes does not change during processing raw data
#15
marcmaxson
closed
5 years ago
0
Renamed repo and all internal references
#14
marcmaxson
closed
5 years ago
0
minor bug fixes, 27k array support
#13
marcmaxson
closed
5 years ago
0
Tutorial figure fix
#12
markt
closed
5 years ago
0
version bump for release 1.0.5
#11
marcmaxson
closed
5 years ago
0
Tutorial fixes
#10
marcmaxson
closed
5 years ago
0
Tutorial fixes
#9
marcmaxson
closed
5 years ago
0
Feature/beta
#8
marcmaxson
closed
5 years ago
0
CLI betas, Methpype full tutorial
#7
marcmaxson
closed
5 years ago
0
Full tutorial
#6
marcmaxson
closed
5 years ago
0
Feature/beta
#5
marcmaxson
closed
5 years ago
1
Feature/create sample sheet
#4
marcmaxson
closed
5 years ago
0
Need 27k sample for unit testing
#3
marcmaxson
closed
5 years ago
1
Fixes to integrations, after changing repo
#2
marcmaxson
closed
5 years ago
0
copied wrong branch into this fresh repo; this is the most updated version.
#1
marcmaxson
closed
5 years ago
1
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