GELOG adam-ibs issues - Githubissues

GELOG / adam-ibs

Ports the IBS/MDS/IBD functionality of Plink to Spark / ADAM

Apache License 2.0

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[Ubuntu, Java 7] No configuration setting found for key 'akka.version'

#52 davidonlaptop opened 8 years ago
1
Use a single command to build adam-ibs

#51 davidonlaptop closed 8 years ago
2
Failed to execute goal on project adam-ibs-core: Could not resolve dependencies

#50 davidonlaptop opened 8 years ago
1
Find a project name!

#49 davidonlaptop opened 8 years ago
0
Cleanup the repo used during MGL804's summer

#48 davidonlaptop closed 8 years ago
2
Find a tool that evaluates the quality of the code

#47 davidonlaptop opened 8 years ago
0
Karim

#46 iki-v closed 8 years ago
0
Parametrage environnement de developpement.

#45 iki-v closed 9 years ago
10
scala-Logging

#44 karim73 closed 9 years ago
4
Mapping des données .ped, .map, .bin, .fam, .bed

#43 iki-v closed 8 years ago
22
Règle de codage

#42 ghost opened 9 years ago
1
Object persistance to file

#41 iki-v closed 9 years ago
0
Réunions

#40 iki-v opened 9 years ago
19
Logging processing

#39 iki-v closed 8 years ago
11
Implement the parser for the CLI option

#38 ghost closed 9 years ago
14
Describe "tree" structure for CLI option

#37 ghost closed 9 years ago
2
List of available command line option of the features implemented in MGL804

#36 ghost closed 9 years ago
4
List of available CLI parsers librairies

#35 ghost closed 9 years ago
2
Calculate IBD (--genome)

#34 sfcwallace closed 8 years ago
0
IBD sharing expected value, based on just .fam/.ped relationship (--genome)

#33 sfcwallace closed 8 years ago
0
Relationship type inferred from .fam/.ped file (--genome)

#32 sfcwallace opened 9 years ago
9
IBS Clustering outliers format

#31 iki-v closed 9 years ago
1
MDS analysis formats

#30 iki-v opened 9 years ago
2
IBS clustering formats

#29 iki-v opened 9 years ago
1
Association analysis

#28 davidonlaptop opened 9 years ago
0
IBS-IBD Estimation

#27 davidonlaptop opened 9 years ago
0
Add a Gitter chat badge to README.md

#26 gitter-badger closed 9 years ago
0
Getting started

#25 davidonlaptop closed 9 years ago
0
Use a dependency manager to build the project

#24 davidonlaptop closed 9 years ago
1
Command-line (CLI) option parser for Scala

#23 davidonlaptop closed 9 years ago
5
Persistence for clustering outliers using ADAM format

#22 davidonlaptop opened 9 years ago
0
IBS clustering: outlier detection

#21 davidonlaptop opened 9 years ago
0
waffle.io Badge

#20 waffle-iron closed 9 years ago
0
Persistence for MDS using ADAM format

#19 davidonlaptop opened 9 years ago
0
MDS constraint: --mds-cluster, --within

#18 davidonlaptop opened 9 years ago
0
Multidimensional scaling plots (--mds-plot)

#17 davidonlaptop opened 9 years ago
0
Persistence of MIBS and MDIST with ADAM format

#16 davidonlaptop opened 9 years ago
0
IBS similarity matrix (--matrix, --distance-matrix) using MIBS / MDIST formats

#15 davidonlaptop opened 9 years ago
1
Persistence of IBS cluster / HH files with ADAM format

#14 davidonlaptop opened 9 years ago
0
IBS clustering constraint: cluster by phenotype (--match, --match-type)

#13 davidonlaptop opened 9 years ago
0
missinIBS clustering constraint: g genotype data (--ibm)

#12 davidonlaptop opened 9 years ago
0
IBS clustering constraint: fixed number of clusters (--K)

#11 davidonlaptop opened 9 years ago
0
IBS clustering constraint: population concordance test (--ppc, --ppc-gap)

#10 davidonlaptop opened 9 years ago
0
IBS clustering constraint: cluster by phenotype (--cc)

#9 davidonlaptop opened 9 years ago
0
IBS clustering constraint: maximum cluster size (--mc, --mcc)

#8 davidonlaptop opened 9 years ago
0
IBS clustering analysis without constraints (--cluster)

#7 davidonlaptop opened 9 years ago
0
Persistence of Genome-wide IBS/IBD Pairwise Metrics with ADAM format

#6 davidonlaptop opened 9 years ago
0
Persistence of Variant/Genotype with ADAM format

#5 davidonlaptop closed 8 years ago
18
Calculate the pairwise IBD/IBS metrics - Part II (--genome-full)

#4 davidonlaptop opened 9 years ago
0
Calculate the pairwise IBD/IBS metrics - Part I (--genome)

#3 davidonlaptop closed 8 years ago
3