issues
search
HopkinsIDD
/
flepiMoP
The Flexible Epidemic Modeling Pipeline
https://flepimop.org
GNU General Public License v3.0
9
stars
4
forks
source link
issues
Newest
Newest
Most commented
Recently updated
Oldest
Least commented
Least recently updated
[Bug]: Clean Up `flepicommon` Library Call
#351
TimothyWillard
opened
1 month ago
0
[Bug]: `flepiconfig` Test Suite Currently Does Not Pass
#350
TimothyWillard
opened
1 month ago
0
[Feature request]: Extract `Compartments.plot` Into A Standalone Function
#349
TimothyWillard
opened
1 month ago
1
Documentation
#348
jcblemai
closed
1 month ago
0
Add emcee functionality to flepiconfig writer options in print_inference_statistics
#347
saraloo
closed
1 month ago
1
[Feature request]: Add emcee options to flepiconfig R package
#346
saraloo
closed
1 month ago
1
[Bug]: Document/Test `gempyor.compartments`
#345
TimothyWillard
opened
1 month ago
0
[Feature request]: Convert `gempyor.simulation_component.SimulationComponent` To An Abstract Class
#344
TimothyWillard
opened
1 month ago
0
[Feature request]: YAML Linting
#343
TimothyWillard
opened
1 month ago
3
[Feature request]: Generic Cluster Config
#342
TimothyWillard
opened
1 month ago
2
[Feature request]: Add `set_zero_to` Field To Individual Statistics Entries In Config
#341
TimothyWillard
opened
1 month ago
0
[Feature request]: Change `resample_skipna` Default To `None` In `gempyor.statistics.Statistic`
#340
TimothyWillard
opened
1 month ago
0
Auto Generate `environment.yml`
#339
TimothyWillard
closed
1 month ago
2
Main state fits
#338
shauntruelove
closed
1 month ago
0
Support providing multi config files
#336
pearsonca
closed
2 weeks ago
23
[Bug]: gitbook usage
#335
pearsonca
opened
1 month ago
0
[Feature request]: R package re-organization
#334
pearsonca
opened
1 month ago
0
Change postprocessing time on rockfish from 60 min to 240 min
#333
twallema
closed
1 month ago
0
[Bug]: Upgrade `flepicommon`'s `covidcast` Dependency To `epidatr`
#332
TimothyWillard
opened
1 month ago
3
Generic HPC Install Script
#329
TimothyWillard
closed
3 weeks ago
14
[Bug]: Name our inference scheme and package
#328
jcblemai
opened
1 month ago
0
Removing the auto-labeler for issue tags, priority levels in our issue templates
#327
emprzy
closed
1 month ago
5
[Feature request]: error message from gempyor-simulate when given non-forward simulation settings
#325
pearsonca
opened
1 month ago
2
Update README.md
#324
alsnhll
closed
1 month ago
0
Make main r scripts executable CLI
#323
pearsonca
closed
3 weeks ago
8
[Feature request]: Harmonize EMCEE files saved to be exactly similar that classical inference
#322
jcblemai
opened
1 month ago
1
Update docs running on rockfish
#321
twallema
closed
1 month ago
2
Inference run does not work in MINGW64 environment
#320
kimberlynroosa
opened
1 month ago
0
Refine and prune GitHub issue labels
#319
emprzy
closed
2 days ago
12
[Bug]: Weird behaviours in EMCEE
#318
jcblemai
closed
1 month ago
4
[Bug]: Not getting the label printed on issue template
#317
jcblemai
closed
1 month ago
3
[Bug]: Changing anything likelyhood (statistic, aggregation, data) compromise emcee acceptances.
#316
jcblemai
closed
1 month ago
0
[Bug]: Missing `h5py` Dependency For `gempyor`
#315
TimothyWillard
closed
2 days ago
0
[Feature request]: Convert Gempyor's `setup.cfg` to `pyproject.toml`
#314
TimothyWillard
closed
2 days ago
0
Improving readability/consistency of errors/exceptions in `gempyor`.
#313
emprzy
closed
1 week ago
1
Code chunk that does not execute in `.../src/gempyor/initial_conditions.py` because it follows a `raise ValueError` statement
#312
emprzy
opened
2 months ago
1
Some preliminary work on emcee batch
#311
jcblemai
opened
2 months ago
0
Standardize and expand logging within `gempyor`
#310
emprzy
opened
2 months ago
2
[small Bug/kind of an enhancement]: Initial conditions plugins don't save initial conditions in an easily readable format
#309
saraloo
opened
2 months ago
0
[Bug]: Install R packages "tidy graph" and "graph" on Rockfish cluster before running `Rscript build/local_install.R`
#308
twallema
closed
3 weeks ago
2
Expanding `gempyor` unit testing framework to include exception checks
#307
emprzy
opened
2 months ago
1
`utils.py` function `profile()` has potentially unused arguments `sort_by`, `lines_to_print`, and `strip_dirs`
#306
emprzy
opened
2 months ago
7
Fixing pull request template formatting
#305
emprzy
closed
2 months ago
0
Document/Unit Test `gempyor.statistics`
#304
TimothyWillard
closed
1 month ago
4
Updated tutorials taken from flepimop_sample
#303
alsnhll
closed
1 month ago
2
Normalization enforces homogeneous mixing across all model strata except spatial patch
#302
twallema
opened
2 months ago
0
[Bug]: Disease state given to gempyor in a `proportional_to` with length greater than one, it gets cut off at a length of one and is interpreted further without warning
#301
twallema
opened
3 months ago
2
[Bug]: `gempyor.statistics` Missing Documentation/Unit Tests
#300
TimothyWillard
closed
1 month ago
4
[Bug]: Specifying a transition proportional to a sum of states only uses one of states included in the sum
#299
twallema
opened
3 months ago
3
[Bug]: Using disease state names 'I1' and 'I2' only works when `proportional_to` are equal to "source"
#298
twallema
closed
3 months ago
4
Previous
Next