IMB-Computational-Genomics-Lab ascend issues

IMB-Computational-Genomics-Lab / ascend

R package - Analysis of Single Cell Expression, Normalisation and Differential expression (ascend)

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issues

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ascend EMSet object bug

#30 atomnh opened 4 years ago
0
Using a already processed and normalized dataset.

#29 daacarri opened 5 years ago
0
Subset Cells with Gene Label

#28 daacarri closed 5 years ago
3
addGeneLabel function is nonexistent

#27 daacarri closed 5 years ago
1
Installation problem

#26 DeltaMethod721 opened 5 years ago
1
"Please ensure 'counts' are in your supplied assay list"

#25 daacarri closed 5 years ago
4
runCORE removes some cells

#24 mkrzak opened 5 years ago
2
error when running runDESeq if both condition.a and condition.b contain more than 1 groups

#23 lixin4306ren opened 5 years ago
1
runTSNE step couldn't finish

#22 lixin4306ren opened 5 years ago
3
which data type input to runCORE

#21 mkrzak closed 5 years ago
2
Problem in running scranNormalise

#20 mkrzak closed 5 years ago
6
Problem with "newEMSet"

#19 cmt6 opened 6 years ago
9
Vignettes Not Found By R

#18 DarioS closed 6 years ago
1
Volcano plots

#17 asenabouth closed 5 years ago
0
Pathway analysis

#16 asenabouth closed 5 years ago
0
Clustering options

#15 asenabouth closed 5 years ago
1
Error: BiocParallel errors

#14 MichaelPeibo closed 6 years ago
11
Failed to convert em.set to SCESet or SingleCellExperiment

#13 MichaelPeibo closed 6 years ago
1
A putative error in Adding additional metadata to the EMSet

#12 MichaelPeibo closed 6 years ago
2
error when PlotGeneralQC(em.set)

#11 MichaelPeibo closed 6 years ago
3
failed to install the packages

#10 MichaelPeibo closed 6 years ago
2
SubsetCondition

#9 asenabouth closed 6 years ago
1
cluster 0

#8 jonxujun closed 6 years ago
7
update AEMSet to EMSet

#7 slukowski closed 6 years ago
3
error in scranNormalise(em.set)

#6 jonxujun closed 6 years ago
2
joining multiple matrices -> NewEMSet

#5 slukowski closed 6 years ago
3
missing characters in the RGC_Tutorial.pdf file

#4 jonxujun closed 6 years ago
2
MergeExprsMtx function does not exist?

#3 sushilashenoy closed 6 years ago
4
NewAEMSet requires the genes matrix to be in order 1: ensembl_id then 2: gene_name

#2 quanaibn closed 6 years ago
3
FindOptimalClusters() failing at stability values

#1 slukowski closed 6 years ago
1