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ImagoXV
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NanoASV
NanoASV official repo
GNU General Public License v3.0
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Dev
#71
ImagoXV
closed
1 month ago
1
use vsearch option to eliminate a call to awk
#70
frederic-mahe
closed
1 month ago
1
Dev
#69
ImagoXV
closed
1 month ago
0
Singularity keeps looking for bin outside the container
#68
ImagoXV
closed
1 month ago
3
Dev
#67
ImagoXV
closed
1 month ago
0
No control over Porehcop cpu usage.
#66
ImagoXV
opened
2 months ago
0
Update README
#65
ImagoXV
closed
2 months ago
0
Dev
#64
ImagoXV
closed
2 months ago
0
Fixed taxa_name problems with unknown sequences and phylo tree
#63
ImagoXV
closed
2 months ago
0
Dev
#62
ImagoXV
closed
2 months ago
0
Docker image run with singularity. Error phyloseq R package : "Cannot open shared object"
#61
ImagoXV
closed
2 months ago
8
Should remove singleton before multiple alignements
#60
ImagoXV
opened
2 months ago
0
Modified --help message
#59
ImagoXV
closed
2 months ago
0
Unknown clusters phylogeny problem solved
#58
ImagoXV
closed
2 months ago
0
To do : Reimplement unknown sequences cluster discard
#57
ImagoXV
closed
2 months ago
1
Singularity version known Issue : WARNING: could not mount /etc/localtime: not a directory
#56
ImagoXV
opened
2 months ago
0
Dev
#55
ImagoXV
closed
2 months ago
1
Dev
#54
ImagoXV
closed
3 months ago
0
Dev
#53
ImagoXV
closed
3 months ago
0
script should test for the presence of required binaries
#52
frederic-mahe
closed
3 months ago
1
Dev
#51
ImagoXV
closed
6 months ago
0
fix CITATION.cff
#50
frederic-mahe
closed
6 months ago
0
Binary Realease ?
#49
ImagoXV
closed
3 months ago
3
Dev
#48
ImagoXV
closed
6 months ago
0
Sync pull request
#47
ImagoXV
closed
7 months ago
0
Imago xv licence patch
#46
ImagoXV
closed
7 months ago
0
fix bug
#45
frederic-mahe
closed
7 months ago
1
create all folders at once
#44
frederic-mahe
closed
7 months ago
1
avoid overlap if two instances of nanoASV run at the same time
#43
frederic-mahe
closed
7 months ago
1
add a citation file
#42
frederic-mahe
closed
6 months ago
5
Dev
#41
ImagoXV
closed
7 months ago
0
Running nanoasv smoothly
#40
ImagoXV
closed
7 months ago
0
aarch64 - MK1C fail on minimal dataset
#39
ImagoXV
closed
7 months ago
1
update readme - MK1C aarch64 version
#38
ImagoXV
closed
7 months ago
0
update readme
#37
ImagoXV
closed
7 months ago
0
Not running on aarch64
#36
ImagoXV
closed
7 months ago
1
Phyloseq installation is as long as SILVA indexing
#35
ImagoXV
opened
7 months ago
0
Need to update bwa to bwa-mem2
#34
ImagoXV
closed
6 months ago
3
Need to specify software versions for reproducibility
#33
ImagoXV
closed
3 months ago
1
update readme
#32
ImagoXV
closed
7 months ago
0
Fully Fonctional
#31
ImagoXV
closed
7 months ago
0
Subsampling before chimare detection
#30
ImagoXV
closed
7 months ago
1
Subsampling before chimera detection
#29
ImagoXV
closed
3 months ago
1
Dev
#28
ImagoXV
closed
8 months ago
0
Chimera detection #2
#27
ImagoXV
opened
8 months ago
6
First Test on real dataset
#26
ImagoXV
closed
7 months ago
3
Concatenation step is long, need to be executud in parrallel
#25
ImagoXV
closed
8 months ago
1
final minimal version
#24
ImagoXV
closed
8 months ago
0
Dev
#23
ImagoXV
closed
8 months ago
0
Checkpoint system
#22
ImagoXV
closed
7 months ago
1
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