JDACS4C-IMPROVE IMPROVE issues

JDACS4C-IMPROVE / IMPROVE

Libraries and scripts for basic IMPROVE functionalities

MIT License

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Update MODEL_train_improve.py

#178 jonesse3 opened 16 hours ago
1
Add input_dir to templates

#177 jonesse3 opened 16 hours ago
0
Work on parsl_csa docstrings

#176 jonesse3 opened 16 hours ago
0
Update omics_utils.py

#175 jonesse3 opened 18 hours ago
0
Update drug_utils.py

#174 jonesse3 opened 18 hours ago
1
Update drp_utils.py

#173 jonesse3 opened 18 hours ago
0
Update config.py

#172 jonesse3 opened 18 hours ago
1
Work on docstrings for config

#171 jonesse3 opened 20 hours ago
2
Work on docstrings for initializer

#170 jonesse3 opened 20 hours ago
0
exist_ok=True

#169 nkoussa closed 1 day ago
0
Natasha/csa bf updates

#168 nkoussa closed 2 days ago
0
Config for workflows

#167 nkoussa opened 3 days ago
0
Adpartin/parsl csa

#166 adpartin closed 1 week ago
6
update readme

#165 priyanka9991 closed 1 week ago
0
Work on docstrings for drug response application

#164 jonesse3 opened 1 week ago
1
Work on docstrings for LCA, Parsl, utils, metrics

#163 jonesse3 opened 1 week ago
5
Sara/docstrings

#162 jonesse3 closed 17 hours ago
0
Work on docstrings for csa postprocessing

#161 jonesse3 opened 2 weeks ago
2
Bruteforce for learning curve analysis

#160 adpartin opened 2 weeks ago
0
generate splits for learning curve analysis

#159 adpartin closed 2 weeks ago
0
Splits generator for learning curve analysis

#158 adpartin opened 2 weeks ago
0
Check if None for int parameter is read in correctly

#157 jonesse3 opened 2 weeks ago
2
Splits generator

#156 adpartin opened 2 weeks ago
2
jsonargparse

#155 adpartin opened 2 weeks ago
0
setup_improve.sh

#154 adpartin closed 3 weeks ago
2
Update Parsl-CSA readme and Update download_csa.sh with updated wget command

#153 priyanka9991 closed 3 weeks ago
6
Template for setup_improve.sh

#152 priyanka9991 closed 3 weeks ago
2
Remove .yml file

#151 priyanka9991 closed 3 weeks ago
0
Priyanka/fixes

#150 priyanka9991 closed 3 weeks ago
3
Wilke/csa config

#149 wilke closed 3 weeks ago
0
Add env varabiable for TF

#148 wilke opened 3 weeks ago
0
Update README.md for CSA post-processing

#147 adpartin closed 3 weeks ago
2
organize csa utils one place

#146 adpartin closed 3 weeks ago
0
Exclude "index" files from downloading along with benchmark dataset

#145 jonesse3 closed 2 weeks ago
10
Make o/p directories for logging if not created already

#144 priyanka9991 closed 4 weeks ago
2
add pretty printer for dicts and lists with for logger

#143 adpartin closed 4 weeks ago
0
csa workflow - file not found error

#142 wilke closed 4 weeks ago
2
calc global runtime in parsl scripts

#141 adpartin closed 1 month ago
0
update csa postprocess

#140 adpartin closed 1 month ago
0
add logger and timer to ML stages implemented inside python_app(s)

#139 adpartin closed 1 month ago
0
Add parsl_dfk_cleanup()

#138 priyanka9991 closed 1 month ago
0
Adpartin/save subprocess

#137 adpartin closed 1 month ago
0
bruteforce csa

#136 adpartin closed 1 month ago
0
create Timer class

#135 adpartin closed 1 month ago
0
give the option to not use model_file_format

#134 jonesse3 closed 1 month ago
5
major update to store_predictions_df() in utils.py

#133 adpartin closed 1 month ago
0
readme for csa scores

#132 nkoussa closed 3 weeks ago
2
Update README.md

#131 nkoussa closed 1 month ago
0
Update README.md

#130 adpartin closed 1 month ago
0
documentation for bruteforce workflow incl Alex's score-getting script

#129 nkoussa opened 1 month ago
6