JanetMatsen bacteriopop issues

JanetMatsen / bacteriopop

population dynamics for abundances calculated from meta-omics sequencing

Apache License 2.0

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Link to demo notebooks in readme

#25 JanetMatsen opened 8 years ago
0
add docstrings to remaining functions

#24 JanetMatsen opened 8 years ago
0
put the PDFs for your posters in your repos

#23 JanetMatsen opened 8 years ago
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add variance plots to demo notebook

#22 JanetMatsen closed 8 years ago
0
move data aggregation and plotting tools to new .py file?

#21 JanetMatsen opened 8 years ago
0
remove aggregate_adjacency_matrix_over_replicates() in

#20 JanetMatsen opened 8 years ago
0
finish Demo

#19 JanetMatsen closed 8 years ago
0
Complex number warning

#18 JanetMatsen closed 8 years ago
4
Remove all the unnecessary print statements Janet left behind

#17 JanetMatsen closed 8 years ago
0
change "phylogeny" to "taxonomy" everywhere

#16 JanetMatsen opened 8 years ago
0
demo Saghar's sns.heatmap function in the Demo notebook

#15 JanetMatsen closed 8 years ago
1
be able to call a sns.heatmap for just one dataframe

#14 JanetMatsen closed 8 years ago
1
make the signal/noise calculation

#13 JanetMatsen closed 8 years ago
0
delete generate_x_y(adj)?

#12 JanetMatsen closed 8 years ago
1
put all the plots in a /plots/ dir?

#11 JanetMatsen closed 8 years ago
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Make a function that aggregates A matrices

#10 JanetMatsen closed 8 years ago
1
Make Seaborn Heatmap function

#9 JanetMatsen closed 8 years ago
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print taxonomy names more nicely?

#8 JanetMatsen closed 8 years ago
1
find_fixed_adjacency_matrix not working with full_svd=True

#7 JanetMatsen closed 8 years ago
1
updated the demo notebook, added description to dmd function, added h…

#6 Saghar-Hosseini closed 8 years ago
0
Not finished, try to plot but crashed

#5 gaoy316 closed 8 years ago
0
Yuan

#4 pearlphilip closed 8 years ago
0
principal component analysis and feature correlations utils

#3 Saghar-Hosseini closed 8 years ago
0
Added script to load data into dataframes added to branch load_data

#2 pearlphilip closed 8 years ago
1
working feature extraction function

#1 JanetMatsen closed 8 years ago
2