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JoRussell-IDM
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emod-parasite-genetics
A collection of development and example sims for commissioning DTK sims with explicit parasite genetics
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5/5 Gates Review
#25
JoRussell-IDM
opened
3 years ago
1
Read up on current state of IBMs for DR
#24
JoRussell-IDM
opened
3 years ago
0
Update wiki with post on crossover models
#23
JoRussell-IDM
opened
3 years ago
0
Run Long term genetics example sweeps
#22
JoRussell-IDM
opened
3 years ago
1
Sweep the neighborhood size to demonstrate the dynamic range of relatedness structures for epi outcomes
#21
JoRussell-IDM
opened
3 years ago
0
point Dan to FPG git repo for emodpy dev
#20
JoRussell-IDM
opened
3 years ago
0
meeting with Jessica about FPG outputs as IBD inputs
#19
JoRussell-IDM
opened
3 years ago
4
Test new exe with SQL Report bug fix on Belegost
#18
JoRussell-IDM
opened
3 years ago
0
Write SQL Report analyzer
#17
JoRussell-IDM
opened
3 years ago
1
Update the parameter value defaults in Regression test
#16
JoRussell-IDM
opened
3 years ago
0
Write function for creating campaign with specified MAFs
#15
JoRussell-IDM
opened
3 years ago
2
Long run genetic behavior demonstration of FPG
#14
JoRussell-IDM
opened
3 years ago
0
Test immune variation behavior in Garki context: replicates
#13
JoRussell-IDM
opened
3 years ago
0
Test immune variation behavior in Garki context
#12
JoRussell-IDM
opened
3 years ago
2
Test new exe for comparison of Garki to base
#11
JoRussell-IDM
opened
3 years ago
7
Validate the assumption of random strain for var gene sets per genome from literature
#10
JoRussell-IDM
opened
3 years ago
1
Initializing parasite genomes from distributions
#9
JoRussell-IDM
opened
3 years ago
1
Clear up the redundancy of allele roots in infection identity
#8
JoRussell-IDM
opened
3 years ago
1
Testing Parasite Genetics with Recombination
#7
JoRussell-IDM
opened
3 years ago
0
Define a quantitative endpoint for what is "good enough" in Garki sites for 1to1 biting changes
#6
JoRussell-IDM
opened
3 years ago
1
Modify Garki demographics birth/death rate
#5
JoRussell-IDM
opened
3 years ago
1
Update FPG Documentation
#4
JoRussell-IDM
opened
3 years ago
0
Setup Wes with FPG Run environment at HSPH
#3
JoRussell-IDM
opened
3 years ago
0
Sporozoite Decay in the vector
#2
JoRussell-IDM
opened
3 years ago
1
Test epi-validity of 1-to-1 biting
#1
JoRussell-IDM
opened
3 years ago
2