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KangchengHou
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admix-kit
Toolkit for analyzing genetics data from admixed populations
https://kangchenghou.github.io/admix-kit
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Helper function to convert between .lanc and matrix format
#29
kegrinde
opened
1 week ago
0
Can't Download The Reference
#28
TinaYibingChen
opened
1 month ago
11
Index of df_indiv does not match the columns of lanc
#27
michaelofrancis
opened
1 month ago
0
cyvcf2 conflict in haptools-simu-admix
#26
michaelofrancis
opened
1 month ago
1
# Simulate 3-way admixture issues
#25
rpauly
opened
5 months ago
17
have the option for more verbose error message in cli
#24
KangchengHou
closed
5 months ago
0
Fail to install admix-kit
#23
xiw588
closed
1 year ago
3
add partial PGS to the cli interface
#22
KangchengHou
closed
1 year ago
1
refactor to avoid cyclic import
#21
KangchengHou
closed
5 months ago
0
update setup.py
#20
KangchengHou
closed
1 year ago
0
versioning / packaging
#19
KangchengHou
closed
1 year ago
1
consistency between lanc and bp2anc.pl
#18
KangchengHou
closed
1 year ago
1
beagle vs. eagle2 genetic map
#17
KangchengHou
closed
1 year ago
1
admix cli pheno single files
#16
KangchengHou
closed
2 years ago
0
Error in admix lanc_convert
#15
nrosewick
closed
2 years ago
5
Error in Admix assoc marginal (binary)
#14
ThiagoPL
closed
2 years ago
20
Error in assoc-quant
#13
nrosewick
closed
2 years ago
15
ValueError: Lengths must match to compare
#12
nrosewick
closed
2 years ago
3
improve python import admix loading time
#10
KangchengHou
closed
2 years ago
1
Genotype simulation using allele frequencies and LD
#9
KangchengHou
closed
2 years ago
1
p-value = 0, inconsistency between marginal and marginal_fast
#8
KangchengHou
closed
2 years ago
0
add cmake older version error in the document
#7
KangchengHou
closed
2 years ago
0
simulate baseline-LD genetic architecture
#6
KangchengHou
closed
2 years ago
1
align af_chunk
#5
KangchengHou
closed
2 years ago
2
Numerical overflow
#4
yidingdd
closed
2 years ago
1
use plink2 as the storage engine
#3
KangchengHou
closed
2 years ago
0
on-disk memory efficient parser for vcf to zarr
#2
KangchengHou
closed
2 years ago
0
dataset loading with region specified
#1
KangchengHou
closed
2 years ago
1