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Knowledge-Graph-Hub
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neat-ml
Network Embedding All the Things
BSD 3-Clause "New" or "Revised" License
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Generate embeddings from Monarch graph for use in Exomiser
#100
justaddcoffee
opened
1 year ago
0
Update to use most recent `grape` functions
#99
caufieldjh
opened
2 years ago
1
Drop support for Tensorflow and scikit-learn methods
#98
caufieldjh
opened
2 years ago
1
Update to use most recent `grape` functions for link prediction
#97
caufieldjh
opened
2 years ago
0
Include line number in schema validation errors
#96
caufieldjh
opened
2 years ago
0
Updates for config validation
#95
caufieldjh
closed
2 years ago
0
RuntimeError when validation fails isn't very informative
#94
caufieldjh
closed
2 years ago
3
Add grape methods for classifiers
#93
caufieldjh
closed
2 years ago
11
setup.py not needed if using poetry
#92
hrshdhgd
closed
2 years ago
0
Check for metrics params for tf.keras metrics
#91
caufieldjh
closed
2 years ago
1
Output link predictions as SSSOM
#90
caufieldjh
opened
2 years ago
1
Missing key in defining metrics in the config
#89
caufieldjh
closed
2 years ago
0
Making neat-ml poetry-fied (plus tox, black, flake8, and mypy updates)
#88
hrshdhgd
closed
2 years ago
28
Set up test workflow to use `tox`
#87
caufieldjh
closed
2 years ago
1
Name change to `neat_ml` - and prep for release
#86
caufieldjh
closed
2 years ago
1
Convert edge prediction methods to grape methods
#85
caufieldjh
closed
2 years ago
0
Need to get history output for embeddings and classifiers
#84
caufieldjh
opened
2 years ago
0
`poetry`fying the project
#83
hrshdhgd
closed
2 years ago
1
Updates for newest grape
#82
caufieldjh
closed
2 years ago
4
Update for Ensmallen / Embiggen -> grape
#81
caufieldjh
closed
2 years ago
0
Setup.py updates and misc refactoring
#80
caufieldjh
closed
2 years ago
1
Create landing page
#79
caufieldjh
opened
2 years ago
0
Add `neat_schema`
#78
caufieldjh
closed
2 years ago
3
Set up methods for using Ensmallen/Embiggen native methods
#77
caufieldjh
closed
2 years ago
0
Move `graph_path` argument out of `graph_data` arguments
#76
caufieldjh
closed
2 years ago
1
Another fix for unrecognized `graph_path` arg
#75
caufieldjh
closed
2 years ago
1
Fix for TypeError due to extra graph_path keyword
#74
caufieldjh
closed
2 years ago
1
Scheduled NEAT runs fail due to extra `graph_path` keyword
#73
caufieldjh
closed
2 years ago
1
General cleanup and updates
#72
caufieldjh
closed
2 years ago
1
Create docs
#71
caufieldjh
opened
2 years ago
0
Incorporate GNNs
#70
caufieldjh
opened
2 years ago
0
Upload to PyPi
#69
caufieldjh
closed
2 years ago
1
In link prediction, filter nodes by prefix or other slots
#68
caufieldjh
opened
2 years ago
4
Small fix to avoid passing graph_path to Graph loader
#67
caufieldjh
closed
2 years ago
1
Fix for FileNotFoundError with downloads
#66
caufieldjh
closed
2 years ago
1
Loading from URL looks for wrong filename
#65
caufieldjh
closed
2 years ago
0
Allow config YAML to not contain graph files
#64
caufieldjh
opened
2 years ago
0
New options for loading from URLs
#63
caufieldjh
closed
2 years ago
3
Enable yaml helper to load embeddings from URLs
#62
caufieldjh
closed
2 years ago
0
Add quickstart config and README section
#61
caufieldjh
closed
2 years ago
1
OSError: [Errno 9] Bad file descriptor
#60
caufieldjh
closed
2 years ago
2
Display errors to users at conclusion of NEAT run
#59
caufieldjh
opened
2 years ago
1
Consider incorporating model cards to better describe and benchmark trained ML model
#58
justaddcoffee
opened
2 years ago
0
Add quickstart notebook
#57
caufieldjh
closed
2 years ago
1
Demonstration notebook
#56
caufieldjh
closed
2 years ago
2
pre_run_checks should catch `botocore.exceptions.NoCredentialsError`
#55
caufieldjh
closed
2 years ago
1
Example YAMLs should use different value for loading node types
#54
caufieldjh
closed
2 years ago
1
Add graph loading helper function in the YamlHelper class
#53
caufieldjh
closed
2 years ago
2
Use LinkML to parse and validate NEAT YAML files
#52
justaddcoffee
closed
2 years ago
3
Create index.html upon uploading new output
#51
caufieldjh
opened
2 years ago
2
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