LTLA scRNAseq issues - Githubissues

LTLA / scRNAseq

Clone of the Bioconductor repository for the scRNAseq package.

http://bioconductor.org/packages/devel/data/experiment/html/scRNAseq.html

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issues

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DataFrame Conversion Error

#56 DarioS closed 3 months ago
2
test errors: Error in `h(simpleError(msg, call))`: error in evaluating the argument 'seed' in selecting a method for function 'DelayedArray': Error in h5checktype(). Argument not of class H5IdComponent.

#55 mr-c closed 3 months ago
4
ZilionisLungData "ND" cell type

#54 chklee30 opened 5 months ago
2
req_error error triggered by downloading the lun spikein 2017 data (R 4.4, curl 8.6.0, bioc 3.19)

#53 lcolladotor opened 5 months ago
7
Unable to access package functions properly

#52 gnvalbuena closed 6 months ago
1
Missing G2 phase in LengESCData

#51 bug1303 opened 6 months ago
1
Change of assay name in LengESCData

#50 PeteHaitch closed 7 months ago
2
altExp data being stored as SummarizedExperiment in non-legacy data

#49 PeteHaitch closed 7 months ago
2
colData change for SegerstolpePancreasData in BioC 3.19

#48 PeteHaitch closed 7 months ago
3
colData change for GrunPancreasData in BioC 3.19; worth making `legacy = TRUE` the default in BioC 3.19

#47 PeteHaitch closed 7 months ago
2
'Invalid cross-device link' when loading data using gypsum backend

#46 grimbough closed 8 months ago
2
symbol column dropped from rowData of SegerstolpePancreasData (devel)

#45 lgeistlinger opened 8 months ago
5
extreme value detection event with new PaulHSCData, not seen in legacy call

#44 vjcitn opened 8 months ago
11
introduce pubmed links used for README.md and datasetsPage() function

#43 vjcitn closed 9 months ago
7
Switch to gypsum backend for saving and loading datasets.

#42 LTLA closed 8 months ago
0
Add developing human brain atlas

#41 liezeltamon opened 1 year ago
1
ExperimentHub with zero records

#40 Pedramto89 opened 1 year ago
6
datasets in scRNAseq can't be retrived for reference mapping

#39 tufeiyinjie opened 1 year ago
1
Fix `WuKidneyData` to attach its colData correctly

#38 LTLA opened 2 years ago
0
It is possible to add a scRNA-seq data to your package?

#37 kaanokay closed 2 years ago
2
make Human Cell Atlas datasets installable

#36 massonix opened 3 years ago
1
Add Ledergor data

#35 milanmlft closed 3 years ago
3
Adding Tabula Muris Senis datasets

#34 StefaniAstrologo closed 3 years ago
4
cell identity label of reference data

#33 miaomiaotan opened 3 years ago
1
Create BunisHSPCData

#32 dtm2451 closed 3 years ago
4
Adding Fletcher et al. (2017) data

#31 drisso closed 3 years ago
5
Provide more options beyond intersecting genes

#30 LTLA opened 3 years ago
0
Support mapping to different Ensembl versions

#29 LTLA opened 3 years ago
0
Add a Bunis HSPC data getter

#28 LTLA opened 3 years ago
4
Update metadata

#27 dtm2451 closed 3 years ago
6
Began adding the Bunis dataset.

#26 LTLA closed 3 years ago
0
Problem with importing Zilionis data

#25 bieniu777 closed 3 years ago
6
Error when loading some human PBMC data

#24 kunszhan closed 3 years ago
1
Adding data set using data from secondary source

#23 twillis209 closed 3 years ago
2
could not find function "KotliarovPBMCData"

#22 Yale73 closed 4 years ago
4
CITEseq Kotliarov 2020 dataset

#21 sorjuela closed 4 years ago
5
data(allen) no longer works

#20 flying-sheep closed 4 years ago
4
Error in GrunPancreasData() : could not find function "GrunPancreasData"

#19 purod closed 3 years ago
3
Add the Cell Hashing datasets

#18 LTLA closed 4 years ago
0
add example citeseq rmd

#17 sorjuela closed 4 years ago
8
CITEseq data?

#16 sorjuela closed 4 years ago
2
Seurat versions?

#15 jr-leary7 closed 4 years ago
4
Export spermatogenesis data

#14 csoneson closed 4 years ago
0
ZilionisLungData Error

#13 arsenij-ust closed 4 years ago
2
Add velocity data

#12 csoneson closed 4 years ago
8
WIP: Added Zilionis dataset

#11 jenzopr closed 4 years ago
12
Spike concs for Paul & Buettner data

#10 alanocallaghan closed 4 years ago
6
Add spike in counts for Zeisel data

#9 alanocallaghan closed 4 years ago
12
Bioconductor package outdated

#8 qhmu closed 4 years ago
2
Versions Not Following Bioconductor System

#7 DarioS closed 5 years ago
5