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LongTailBio
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python-metagenscope
MetaGenScope-CLI is used to upload data sets to the MetaGenScope web platform.
MIT License
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#33
bchrobot
closed
5 years ago
0
Refactor to use shared Click context
#32
bchrobot
opened
5 years ago
0
Continuous deploy to PyPI
#31
bchrobot
closed
5 years ago
0
Numerous small changes
#30
bchrobot
closed
5 years ago
1
Use external SampleSource package
#29
bchrobot
opened
5 years ago
0
Add command for deleting a sample group
#28
bchrobot
closed
5 years ago
0
[WIP] organization API and datasuper groups
#27
dcdanko
closed
5 years ago
0
[WIP] Switch to using standard logger
#26
bchrobot
opened
6 years ago
2
Source metadata automatically during Uploader.create_sample()
#25
bchrobot
opened
6 years ago
0
Fix CI
#24
bchrobot
closed
6 years ago
0
Add pandas dependency
#23
bchrobot
closed
6 years ago
0
post milken cleanup
#22
dcdanko
closed
6 years ago
1
parser
#21
dcdanko
closed
6 years ago
0
metadata upload
#20
dcdanko
closed
6 years ago
0
dryrun upload
#19
dcdanko
closed
6 years ago
0
Add real test suite and CI
#18
dcdanko
opened
6 years ago
1
cleaned up parser code
#17
dcdanko
closed
6 years ago
0
removed shortbred added CARD amrs
#16
dcdanko
closed
6 years ago
0
krakenhll upload
#15
dcdanko
closed
6 years ago
0
"Fix" CI build
#14
bchrobot
closed
6 years ago
1
added parsing for ancestry
#13
dcdanko
closed
6 years ago
0
added macrobe upload
#12
dcdanko
closed
6 years ago
0
added beta diversity upload
#11
dcdanko
closed
6 years ago
0
Add Ancestry parser
#10
bchrobot
closed
6 years ago
1
Add Resistome AMRs parser
#9
bchrobot
closed
6 years ago
1
Add Beta Diversity parser
#8
bchrobot
closed
6 years ago
1
Add Quantify Macrobial parser
#7
bchrobot
closed
6 years ago
1
Add metadata upload command
#6
bchrobot
opened
6 years ago
5
[WIP] Bug bash and refactor
#5
bchrobot
closed
6 years ago
0
Feature.more tools
#4
dcdanko
closed
6 years ago
0
Add Danger for automated code review conventions
#3
bchrobot
opened
6 years ago
1
Refactor CLI as wrapper around module
#2
bchrobot
closed
6 years ago
0
Write SampleFileSource for file system
#1
bchrobot
closed
5 years ago
2