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LucasFVoges
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GRADA
simple GRep ADapter Analyser
MIT License
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position finding R - skip for too big files
#38
LucasFVoges
opened
3 years ago
0
position finding - input correction of reads with lower mismatches
#37
LucasFVoges
opened
3 years ago
0
Skip plots rework please
#36
LucasFVoges
opened
3 years ago
0
Mismatches over 3 not working
#35
LucasFVoges
closed
3 years ago
2
update Test function ooutput
#34
LucasFVoges
opened
3 years ago
0
add Test functions
#33
LucasFVoges
opened
3 years ago
0
Check for Mismmatch greater than shortest adapter?
#32
LucasFVoges
closed
3 years ago
1
Better Mismatches: max mismatches rule
#31
LucasFVoges
closed
3 years ago
1
temp data delete option
#30
LucasFVoges
closed
3 years ago
1
AGREP Maximum?
#29
LucasFVoges
closed
3 years ago
2
FASTA support
#28
LucasFVoges
opened
3 years ago
2
grada_plot_bar(_full) ERROR in KILLS
#27
LucasFVoges
closed
3 years ago
1
NumCores can become bleow 1
#26
LucasFVoges
closed
3 years ago
1
Make Options dependent on input
#25
LucasFVoges
opened
3 years ago
0
agrep function allows only one option (case sensitive is therefore not possible)
#24
LucasFVoges
closed
3 years ago
1
Input whitespace problem
#23
LucasFVoges
closed
3 years ago
1
compressed file handling
#22
LucasFVoges
closed
3 years ago
1
pdf-output table
#21
LucasFVoges
opened
3 years ago
0
multiple finding in one read?
#20
LucasFVoges
closed
3 years ago
2
adapter_file handling
#19
LucasFVoges
opened
3 years ago
0
@SEQ_ID will be searched!
#18
LucasFVoges
closed
3 years ago
1
Adapter List Duplicate will be a bug
#17
LucasFVoges
closed
3 years ago
2
Better Mismatches: Make a mismatch per x bases option
#16
LucasFVoges
opened
3 years ago
2
Better Mismatches: Include Quality Score?
#15
LucasFVoges
opened
3 years ago
0
Better Mismatches: Include N as a non mismatch charakter?
#14
LucasFVoges
opened
3 years ago
0
Statistical knowlege of sequence distribution
#13
LucasFVoges
opened
3 years ago
3
Read File whitespaces
#12
LucasFVoges
closed
3 years ago
1
example vignette is broken
#11
LucasFVoges
closed
3 years ago
3
better example data
#10
LucasFVoges
opened
3 years ago
1
readlength is a problematic variable
#9
LucasFVoges
closed
3 years ago
4
R (>= 3.5.0) dependency?
#8
LucasFVoges
closed
3 years ago
0
make parallel an optional thing
#7
LucasFVoges
closed
3 years ago
0
Counting of Reads and length and quality
#6
LucasFVoges
opened
3 years ago
1
Alternative Barplot
#5
LucasFVoges
opened
3 years ago
0
Mismatch analysis in Histogramm
#4
LucasFVoges
closed
3 years ago
1
split functions into calc and display to reduce recomputing
#3
LucasFVoges
closed
3 years ago
1
Alternative Table
#2
LucasFVoges
closed
3 years ago
1
barplot bug if no or one plot will be available
#1
LucasFVoges
closed
3 years ago
1