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MICS-Lab
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scyan
Biology-driven deep generative model for cell-type annotation in cytometry. Scyan is an interpretable model that also corrects batch-effect and can be used for debarcoding or population discovery.
https://mics-lab.github.io/scyan/
BSD 3-Clause "New" or "Revised" License
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Discrepancy in Results Between W&B Tuning and Local Workflow
#39
fy711
opened
4 days ago
1
[Bug]
#38
Maelle83
opened
3 months ago
1
hotfix matplotlib get_cmap
#37
quentinblampey
closed
4 months ago
0
Use pytometry
#36
quentinblampey
opened
4 months ago
0
Matplotlib Version got bumped up to 3.9.0 -> change in location of get_cmap function
#35
dansteiert
closed
4 months ago
3
rename compensate
#34
quentinblampey
closed
5 months ago
0
v1.6.0
#33
quentinblampey
closed
5 months ago
0
[Bug] predict() fails after training on GPU
#32
grst
closed
5 months ago
2
GPU training is slow
#31
grst
closed
6 months ago
3
Is it necessary to pin anndata?
#30
grst
closed
5 months ago
2
Spillover correction
#29
grst
closed
5 months ago
9
Dev
#28
quentinblampey
closed
8 months ago
0
[Bug] NA values in refine_fit if some populations are not predicted
#27
quentinblampey
closed
8 months ago
1
new version with GPU fix
#26
quentinblampey
closed
10 months ago
0
Dev
#25
quentinblampey
closed
10 months ago
0
Dev
#24
quentinblampey
closed
10 months ago
0
GPU support
#23
baj12
closed
10 months ago
16
Dev
#22
quentinblampey
closed
12 months ago
0
fix download badge
#21
quentinblampey
closed
1 year ago
0
minor doc fix
#20
quentinblampey
closed
1 year ago
0
Dev
#19
quentinblampey
closed
1 year ago
0
Merge dev branch into master
#18
quentinblampey
closed
1 year ago
0
Dev
#17
quentinblampey
closed
1 year ago
0
Dev
#16
quentinblampey
closed
1 year ago
0
Dev
#15
quentinblampey
closed
1 year ago
0
install poetry on CI with snok
#14
quentinblampey
closed
1 year ago
0
fixing CI: using poetry
#13
quentinblampey
closed
1 year ago
0
Dev
#12
quentinblampey
closed
1 year ago
0
Dev
#11
quentinblampey
closed
1 year ago
0
Dev
#10
quentinblampey
closed
1 year ago
0
version 1.2.2
#9
quentinblampey
closed
1 year ago
0
minor umap fix when run twice
#8
quentinblampey
closed
1 year ago
0
Dev
#7
quentinblampey
closed
1 year ago
0
version 1.2.0
#6
quentinblampey
closed
1 year ago
0
Dev
#5
quentinblampey
closed
1 year ago
0
Dev
#4
quentinblampey
closed
2 years ago
0
Dev
#3
quentinblampey
closed
2 years ago
0
Dev
#2
quentinblampey
closed
2 years ago
0
README and documentation update
#1
quentinblampey
closed
2 years ago
0