issues
search
MRCIEU
/
ieugwasr
R interface to the IEU GWAS database API
https://mrcieu.github.io/ieugwasr/
Other
73
stars
23
forks
source link
issues
Newest
Newest
Most commented
Recently updated
Oldest
Least commented
Least recently updated
Issue with available_outcomes() in ieugwasr Package: Error Accessing status_code
#55
JACKDDDDDDDDDDDD
closed
6 months ago
2
Error in loading ‘ieugwasr 0.1.8’
#54
Fhm2023
closed
6 months ago
0
Help with .onLoad Error in ieugwasr Package when Calling available_outcomes()
#53
JACKDDDDDDDDDDDD
closed
6 months ago
1
some errors
#52
Wushihao1
opened
6 months ago
2
phewas function give inconsistent results
#51
YuxiaoRuoyao
opened
7 months ago
0
JWT authentication
#50
explodecomputer
closed
6 months ago
0
Can I use ieugwasr_to_coloc( ) without samplesize?
#49
chuting2000
opened
7 months ago
3
47 gwasglue2 output and new ldscores functions
#48
ritarasteiro
closed
6 months ago
12
gwasglue2 output and new ldscores functions
#47
ritarasteiro
closed
6 months ago
0
Argument list too long
#46
931902655
closed
8 months ago
0
harmonise_ld_dat not working properly
#45
marwaalarab
opened
9 months ago
0
ld_clump error: Error in file(file, "rt") : cannot open the connection
#44
jdbusby
opened
9 months ago
5
Clump-data Error: Empty reply from server
#43
jdbusby
opened
9 months ago
0
Bug??? Confusion about ld_clump vs ld_clump_local
#42
Rick-Chen-PKU
opened
10 months ago
0
Adding memory argument for ld_clump_local
#41
zillurbmb51
opened
11 months ago
0
ld_clump error
#40
fabianacz
opened
11 months ago
3
P-values less than 300 bork the results when clumping
#39
gushamilton
opened
1 year ago
1
A bug in ieugwasr::ld_matrix_local
#38
sskimb
opened
1 year ago
6
Clumping stopping without error potentially due to tempfile()
#37
Sabor117
opened
1 year ago
0
Error: Warning: No significant --clump results. Skipping.
#36
JonnyBaseball
closed
1 year ago
2
Error: Could not authenticate via any gargle cred function
#35
showers14
closed
11 months ago
3
local ld_clump:Warning: cannot open file 'C:\Users\Zheng\AppData\Local\Temp\RtmpqWMUyA\file65d825722a42.clumped': No such file or directoryError in file(file, "rt") : cannot open the connection
#34
kouji175
opened
1 year ago
21
update ld_matrix_local to create variant ID and standardise
#33
explodecomputer
opened
1 year ago
1
ld_matrix and ld_matrix_local give different results
#32
sophk1
opened
1 year ago
1
Server code: 502; Server is possibly experiencing traffic, trying again...
#31
ZhaoTianyu-zty
opened
1 year ago
2
bug in running ld_clump_local on MacOS
#30
graceliya
opened
1 year ago
1
Server code: 503; Server is possibly experiencing traffic, trying again
#29
jaesoonpark
opened
1 year ago
0
`ieugwasr::check_access_token()`:
#28
bschilder
opened
1 year ago
4
tophits and extract_instruments fail to find some variants
#27
jean997
opened
2 years ago
2
Server code: 503; Server is possibly experiencing traffic. Failed to retrieve results from server.
#26
Gong21
opened
2 years ago
0
error reporting: Error: Could not authenticate via any gargle cred function
#25
zh-zhang1984
opened
2 years ago
0
ieugwasr::ld_matrix cannot extract LD matrix
#24
jajoko
opened
2 years ago
4
Is it possible to extract only a list of variants present in a given study?
#23
jean997
opened
2 years ago
0
Update ld_clump.R
#22
freuerde
closed
7 months ago
2
ld_clump may cann't retain the snp witg lowest p-value
#21
mayubo07
opened
2 years ago
0
Fixes for CRAN/Bioconductor
#20
remlapmot
closed
2 years ago
2
Wrong values from variants_rsid() when querying with vectors n>1
#19
GiulioCentorame
opened
2 years ago
1
How were the ld scores obtained through afl2_list generated?
#18
gunns2
opened
3 years ago
0
Make a separate batch for results from Orru et al.
#17
danielcoral
closed
3 years ago
1
rs1309301702
#16
jinghuazhao
opened
3 years ago
0
explanation of variant metadata fields?
#15
vjcitn
opened
3 years ago
0
Error: Failed to install 'ieugwasr' from GitHub:
#14
syywong
closed
3 months ago
1
How to just pull full summary statistics? E.g. as input for LDSC
#13
NathanSkene
closed
3 years ago
1
Inconsistent beta, se and p-value
#12
jean997
opened
3 years ago
0
problem to call available_outcomes()
#11
helenysl
opened
4 years ago
0
obtained unreasonable result using ld_clump function
#10
Tzu-Ting-Chen
opened
4 years ago
0
access token
#9
mcgml
closed
4 years ago
2
Error: Failed to install 'ieugwasr' from GitHub
#8
nsdeboer
closed
6 months ago
2
Update api.R
#7
mcgml
closed
4 years ago
1
regional ld plot
#6
explodecomputer
opened
4 years ago
0
Previous
Next