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MannLabs
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alphabase
Infrastructure of AlphaX ecosystem
https://alphabase.readthedocs.io
Apache License 2.0
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calc_precursor_mz leads to unexpected behavior
#92
GeorgWa
closed
1 year ago
2
Updated Library Handling
#91
GeorgWa
closed
1 year ago
2
Updated Spectral Library Handling
#90
GeorgWa
closed
1 year ago
1
Development
#88
jalew188
closed
1 year ago
1
missing proteins and genes in alphabase.spectral_library.reader.SWATHLibraryReader
#87
jalew188
closed
1 year ago
0
remove is_pd_dataframe attr for DataFrame in hdf
#86
jalew188
closed
1 year ago
2
msfragger pepxml reader support for c-term modifications
#85
yangkl96
closed
1 year ago
0
use flat_frag_start/stop_idx other than frag_start/stop_idx for flatten fragments
#84
jalew188
closed
1 year ago
12
modloss_importance in modification.tsv
#83
yangkl96
closed
1 year ago
2
fix for N-term mods
#82
yangkl96
closed
1 year ago
4
flexible frag representation to add frags
#81
jalew188
closed
1 year ago
1
mmh3 installation error
#80
jalew188
closed
1 year ago
1
replace mmh3 with xxhash
#79
jalew188
closed
1 year ago
1
CHORE: prot decoy
#77
jalew188
closed
1 year ago
1
rename methods; tutorials for dev
#76
jalew188
closed
1 year ago
1
Development
#75
jalew188
closed
1 year ago
1
Development
#74
jalew188
closed
1 year ago
1
readme
#73
jalew188
closed
1 year ago
0
Python=3.9 workspace
#72
jalew188
closed
1 year ago
0
Development
#71
jalew188
closed
1 year ago
0
v1.0.0
#70
jalew188
closed
1 year ago
1
Uniformly distributed kernels for LOESS regression
#69
GeorgWa
closed
1 year ago
2
DiaNN-like supervised Percolator
#68
jalew188
closed
1 year ago
1
v0.4.0
#67
jalew188
closed
1 year ago
0
frag_end_idx->frag_stop_idx
#66
jalew188
closed
1 year ago
1
Development
#65
jalew188
closed
1 year ago
0
Development
#64
jalew188
closed
1 year ago
1
Development
#63
jalew188
closed
1 year ago
0
Development
#61
jalew188
closed
1 year ago
1
Aligning spectral library names
#60
GeorgWa
closed
1 year ago
1
Development
#59
jalew188
closed
1 year ago
1
add nbdev_test to github actions
#58
jalew188
closed
1 year ago
1
Reannotate fragments
#57
GeorgWa
closed
1 year ago
2
Sphinx doc
#56
jalew188
closed
1 year ago
2
msgfplus rescoring support or AlphaPeptDeep format example
#62
gsaxena888
closed
1 year ago
4
Reannotate precursors with fragments from different speclib
#55
GeorgWa
closed
1 year ago
3
GeorgW Diann decoy fix
#54
jalew188
closed
1 year ago
1
Flat lib
#53
jalew188
closed
1 year ago
5
Georg w decoy fix
#52
jalew188
closed
1 year ago
1
rescore
#51
jalew188
closed
1 year ago
1
fix #48 diann decoylib bug
#49
GeorgWa
closed
1 year ago
3
DiaNNDecoyLib decoy generation fails with Selenocystein
#48
GeorgWa
closed
1 year ago
1
added fragment handling functionality
#47
GeorgWa
closed
1 year ago
2
Translate AB's library format into other library formats (e.g. tsv)
#46
jalew188
closed
2 years ago
1
Translate AB's library format into other library formats (e.g. tsv)
#45
jalew188
closed
2 years ago
1
updated weight function
#44
GeorgWa
closed
2 years ago
2
Scoring
#43
jalew188
closed
2 years ago
3
LOESS Regression fails with few datapoints
#42
GeorgWa
closed
2 years ago
0
LOESS Regression
#41
GeorgWa
closed
2 years ago
2
Development
#40
jalew188
closed
2 years ago
1
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