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MattiaPandolfoVR
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MetaPhage
GNU General Public License v3.0
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Error executing process > 'summary (megahit)'
#74
hdflorezr
opened
6 months ago
0
Does skipping graphanalyzer step lead to errors in the next steps?
#73
ilnamkang
closed
9 months ago
1
An error at the graphanalyzer step
#72
ilnamkang
closed
9 months ago
4
Out of memory error at the Qualimap bamqc step
#71
ilnamkang
closed
10 months ago
2
virsorter error
#70
jEMMa7777
opened
10 months ago
1
Unable to build the MetaPhage Environment
#69
SoleilSu
opened
10 months ago
3
Error - Inphared database - vcontact2 Jun2022
#68
carmennns2
opened
10 months ago
1
Issue with vcontact2 classification
#67
MarwanMaj
opened
1 year ago
5
Singularity image not available
#66
fbcorrea
opened
1 year ago
0
Errors in downloading database
#65
xykb86
opened
1 year ago
2
CDHit step Metaphage2
#64
JordanVV
closed
1 year ago
1
Error with available memory
#63
jamesm224
opened
1 year ago
11
Error with VirFinder and Rscript when testing MetaPhage 2 and demo dataset
#62
SaraiFinks
closed
1 year ago
7
Link for metaphage (v1.0) singularity image down
#61
Drjameswynne
closed
1 year ago
1
Link for developmental version MetaPhage2 not accessible
#60
JulianGarneau
closed
1 year ago
1
An error with heatmap(megahit) of MetaPhage v2 beta
#59
ilnamkang
closed
1 year ago
2
Link for downloading databases are down
#58
JulianGarneau
closed
1 year ago
1
An error with virsorter2 of MetaPhage v2 beta
#57
ilnamkang
closed
1 year ago
4
How can I limit the maximum number of CPUs used by MetaPhage?
#56
ilnamkang
opened
1 year ago
3
Reassess diversity metrics without running entire MetaPhage once again
#55
AntonChechushkov
opened
1 year ago
2
HTTP Error downloading vConTACT2
#54
hhy-joseph
closed
1 year ago
4
Discarding human reads
#53
mhmism
closed
1 year ago
2
Error downloading databases for MetapPhage 2 beta version
#52
mhmism
closed
1 year ago
1
RPKM and Bracken
#51
mhmism
opened
1 year ago
0
Error at bowtie2_derep (megahit) on example data set
#50
mhmism
closed
1 year ago
4
Adding Phamb viral contigs to MetaPhage
#49
bhimbbiswa
closed
2 years ago
2
Any chance the CPU requirement could be lowered?
#48
janzheng
closed
1 year ago
4
Error on the downloading the databases
#47
matveykolesnik
closed
2 years ago
2
kraken_files.R error
#46
jflucier
opened
2 years ago
3
Update 3_tutorial.md
#45
onertipaday
closed
2 years ago
1
kraken_file error when running MetaPhage (docker)
#44
vanzyllj
closed
2 years ago
23
Command output empty on example dataset
#43
rmadnantariq
closed
2 years ago
3
pull out viral reads/assembly from metagenome
#42
echopan0731
closed
2 years ago
1
No metadata found
#41
rmadnantariq
closed
2 years ago
6
Krona, VIBRANT and QUAST databases
#40
lxsteiner
opened
2 years ago
3
How to adjust HPC parameter to change resource limit
#39
rmadnantariq
closed
2 years ago
3
Add option to add assembly file
#38
michoug
opened
2 years ago
2
Dev
#37
MattiaPandolfoVR
closed
3 years ago
0
implement bamtocov==2.0.001
#36
lazzarigioele
closed
3 years ago
0
improvements on cd-hit-est and multiqc
#35
lazzarigioele
closed
3 years ago
0
automatic inphared outputs download using Zenodo storage
#34
lazzarigioele
closed
3 years ago
0
improve vcontact2 results using a new approach
#33
lazzarigioele
closed
3 years ago
0
working skeleton of the html report
#32
lazzarigioele
closed
3 years ago
0
implement covtocounts2
#31
lazzarigioele
closed
3 years ago
0
add the graph_analyzer.py script to the pipeline
#30
lazzarigioele
closed
3 years ago
0
add virfinder into the dereplication
#29
lazzarigioele
closed
3 years ago
0
important reserved keyword bugfix
#28
lazzarigioele
closed
3 years ago
0
add virsorter1 to derep
#27
lazzarigioele
closed
3 years ago
0
add Phigaro to dereplication
#26
lazzarigioele
closed
3 years ago
0
implement custom_plot and custom_table in MultiQC !
#25
lazzarigioele
closed
3 years ago
0
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