McGranahanLab CONIPHER-wrapper issues - Githubissues

McGranahanLab / CONIPHER-wrapper

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Chromosomes X and Y are ignored

#12 EsterAH89 closed 9 months ago
0
CONIPHER preprocessing no copy number calls

#11 tobyaicher opened 10 months ago
0
Too many alternative trees - and how to evaluate them?

#10 stefmldk opened 10 months ago
3
Error during calculation of cluster confidence intervals

#9 stefmldk closed 10 months ago
1
Error in plot.window(...) : need finite 'xlim' values

#8 stefmldk opened 10 months ago
1
Some datasets need the coin package, but it seems to have been "commented out" in CONIPHER

#7 stefmldk closed 10 months ago
1
'chr' prefix in the chromosome names in the input.tsv file seems to cause an error even though it should get handled according to the paper

#6 stefmldk opened 10 months ago
1
Updating wrappers

#5 arihueb closed 1 year ago
0
Issue about Error in simpleClusterList[[as.character(ITH1clust)]]

#4 neuroniko opened 1 year ago
1
Issues with Running Scripts Using bash.exe in Windows Conda Environment and Code Errors in run_clustering.R

#3 Elpalet closed 6 months ago
2
M1 Chip Conda Environment Issues

#2 roseisgold closed 10 months ago
2
Question about the input file

#1 Yunuuuu opened 1 year ago
2